Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05317 ATGGAGAGCTTTGCACTCCACTCGCTCTCCACCTCAACCTCCTTCTCTCGCTCTTCCCTACTCCATCATCGTCCTCGCCCAATCTCCAGATCCCAATTGTCTCTTCCATTGAATCCCACTTCACGTTCAATCCCATCTTTCAAATCACCCATCATCTCTCAGGTTTTCCCCTTTCCCTCTAAAGCTTCCACCTTTAATCCTTTCTCAAAACCCCGCGTAACCCACACCCCAATTCAAGCTTCTTCATCTCCTCCACCCTCAAAATCCCCACCTGTTCTTCAGGGCGCAAAGCCCGTTCCTTTCATCATCTCCATATGCATAGGCCTCATTGTTCGTTTCCTGGTTCCCAAACCAGTGGAAGTTACTCCTCAGGCATGGCAATTGCTCTCAATTTTCCTGTCAACCATCGCGGGCCTGGTTCTGAGCCCGTTGCCGGTGGGAGCTTGGGCTTTTCTGGGCTTGACTACCTCTGTGGTGACAAAAACTCTGAGCTTTACAGCGGCTTTCAGCGCCTTCACCAACGAGGTGATTTGGTTGATCGTGATCTCGTTCTTCTTTGCTCGTGGGTTTGTGAAGACTGGTTTAGGGGATAGGATTGCAACTTACTTTGTGAAATGGATGGGAAAGAGCACGTTGGGGTTGTCTTATGGGTTGACATTCAGTGAGATGCTTATTGCACCGGCAATGCCCAGCACCACTGCAAGGGCTGGTGGTGTGTTCTTGCCAATTATTAAGTCACTCTCGCTCTCTGCAGGGAGTGAACCGGGAAATCCCTCGGCTAAGAAGCTGGGGGCTTATCTTGTTCAGAACCAATTCCAGTCTGCTGGTAACTCCAGTGCTCTTTTCCTAACTGCTGCAGCACAAAATCTTCTGTGCATCAAACTAGCAGAGGAGCTTGGGGTGATAGTTTCAAACCCTTGGGTTACTTGGTTTAAGGCGGCTAGTGTACCTGCTCTCATTTGTCTTCTTGCTACACCATTAATTTTATACAAGATCTATCCCCCTGAAATTAAAGACACACCAGAGGCACCTGCCCTGGCTGCAAAGAAACTAGAAAGTATGGGCCCTGTCACTCAAAATGAATGGATTATGATTGCTACAATGCTTCTTGCAGTCTCTTTGTGGATCTTTGGAGACACTATCGGCATAGCAAGTGCTGTAGCTGCAATGATTGGTTTATCAATACTCCTTGTATTAGGAGTCCTTGACTGGAATGACTGCTTGAATGAAAAATCAGCATGGGATACCTTGGCTTGGTTTGCCATTCTAGTAGGCATGGCAAGCCAGCTGACAAACCTTGGTATCGTAAGCTGGATGTCCGATTGTGTTGCCAACGTCCTTCGGTCATTCTCTTTGAGCTGGCCAGCTGCACTAGCTGTTCTTCAGGCAGCTTATTTCTTCATCCACTACCTTTTTGCAAGTCAGACTGGACATGTGGGGGCTTTATACTCTGCATTTCTTGCTATGCATAGGGCAGCTGGTGTTCCTGGTGTTCTTGCAGCACTTGCTTTAGGTTACAATACAAATCTATTTGGTGCAATCACACACTATAGTAGTGGTCAGGCTGCTGTATACTATGGAGGTTTGTCCCTCTCTATAATGTCACATAATTTCATTGTTTTCTCAGCTGGTTATGTAGACCTTCCTGATATATTCAAAACGGGGTTCATTATGGCTGTTATTAATGCTGTCATCTGGGGAGGCGTTGGCTCTGTATGGTGGAAATTTTTGGGATTGTATTGA 1743 0.4682 MESFALHSLSTSTSFSRSSLLHHRPRPISRSQLSLPLNPTSRSIPSFKSPIISQVFPFPSKASTFNPFSKPRVTHTPIQASSSPPPSKSPPVLQGAKPVPFIISICIGLIVRFLVPKPVEVTPQAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTTSVVTKTLSFTAAFSAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTFSEMLIAPAMPSTTARAGGVFLPIIKSLSLSAGSEPGNPSAKKLGAYLVQNQFQSAGNSSALFLTAAAQNLLCIKLAEELGVIVSNPWVTWFKAASVPALICLLATPLILYKIYPPEIKDTPEAPALAAKKLESMGPVTQNEWIMIATMLLAVSLWIFGDTIGIASAVAAMIGLSILLVLGVLDWNDCLNEKSAWDTLAWFAILVGMASQLTNLGIVSWMSDCVANVLRSFSLSWPAALAVLQAAYFFIHYLFASQTGHVGALYSAFLAMHRAAGVPGVLAALALGYNTNLFGAITHYSSGQAAVYYGGLSLSIMSHNFIVFSAGYVDLPDIFKTGFIMAVINAVIWGGVGSVWWKFLGLY. 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05317 580 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 79 580 IPR030676 -
Seca5g05317 580 Pfam Sodium:sulfate symporter transmembrane region 101 531 IPR001898 GO:0016020|GO:0022857|GO:0055085
Seca5g05317 580 NCBIfam DASS family sodium-coupled anion symporter 117 527 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05317 Seca-Chr5 110130017 110134246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05317 1 580 Antiporters AT5G64290 72.680 0.0 807
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05317 - - gmx:100782873 915.22