Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05306 ATGGTTAAGGCTCATAAGTCTTTGCCTTGCCCACAGCATGTGGCTTGGCCATCGCTTGATTTAAATTGTGCCAGCACATTGCCGGAGCCCAGTTTGTATGGCCATTCAGCATATCTGAATCCTAGCACATGTATCTTTCCTGCTGTCAGTGCATTTCCAGGATTCACAGCTCCTACTACCCCAAGCCTGAAGACTAAGCAGACCAATGAAGTGCAAGGATTCCTTCAGTATCCCAATTCAAAATCATGTCTGGAAGGAATACATACTGGAGGGGCTATGCAAAATGCAACTCCTGCATCTTTTCAGAAGAAGTTACTTATTTTTGACCATTCTGGTAATAAGACAAGGTTGTTTTATAGTCCTGTCTTCCCTCTTGTCCAGAGTCCAGTTGTTACTGGTAGGCAATTTGCTCAAGCTTATGATGTAAATGAGGGAGGACAGGCAACTAATATTGGTCAAAATCATTTCCTGAAATACAGTTTACCTGAAGATTCAGATAAGGATCATGTAGTAAATGAAGAAAGTGAAATGCATGAAGACACAGAAGAAATCAATGCATTGCTTTACTCTGATGATTCTGATTCTGGTTCTGATGATGATGATGATGAGGTAGCAAGTACAGGCCATTCTCCATTGGCTACTAAAAGGACTTACGTGATGCAAGAACCATTTGAGGATACAAAGGAGGAGGTTGATAGCACTGATTGGCCAAACAAAAGGCATAAGTTAATTGATGGTGGACACAAAAGATTACCACCACCTGCGGACAGTGCTAGTTCAGTAAGAGTATATGAAAGCTGTGAGTATGTCAGTGATGCTGAATCGAAGTATTCTAGTAGCCAAGTGTATTCTGCCAGGGAAACTGAAGATAATTCAATAGTTGGTGATGTTCAATTGAAAAAGGATAAAATCCGTGAATCATTGAGAGTTCTTGAGAACATAATTCCTGGAGCAAAAGGAAAGCATCCTCTGTTAATCATTGATGGAACTATTGATTACTTAAAATCTTTGATGTCCCAAACTGGTTCAATTGGGGTGAACTATCACTAA 1050 0.4029 MVKAHKSLPCPQHVAWPSLDLNCASTLPEPSLYGHSAYLNPSTCIFPAVSAFPGFTAPTTPSLKTKQTNEVQGFLQYPNSKSCLEGIHTGGAMQNATPASFQKKLLIFDHSGNKTRLFYSPVFPLVQSPVVTGRQFAQAYDVNEGGQATNIGQNHFLKYSLPEDSDKDHVVNEESEMHEDTEEINALLYSDDSDSGSDDDDDEVASTGHSPLATKRTYVMQEPFEDTKEEVDSTDWPNKRHKLIDGGHKRLPPPADSASSVRVYESCEYVSDAESKYSSSQVYSARETEDNSIVGDVQLKKDKIRESLRVLENIIPGAKGKHPLLIIDGTIDYLKSLMSQTGSIGVNYH. 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05306 349 PANTHER TRANSCRIPTION FACTOR BHLH145 10 347 IPR037546 -
Seca5g05306 349 MobiDBLite consensus disorder prediction 189 238 - -
Seca5g05306 349 MobiDBLite consensus disorder prediction 221 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05306 Seca-Chr5 110032946 110035956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05306 82 349 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 38.516 2.03e-33 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05306 - - gmx:100778385 473.781