Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05305 ATGTCACTGTTCACTGCACTGGTTTCGGGAAAAACGGTGACCTTTCTCAGAAGTTTTGGAGCACAAAGGATCCTGGCCAGAACCCTTTCACATTCAAAATTGGCCAAGGTTCTGTTATCAAAGGTATATAATGATAATAACAGCATTCTCAGTTTGTTTCCACTCTTCTTATATCTCGTGTCTTCTAAACCTGCAATTTCAATTCAGATTTGTTCAAAACTATTTCATTTTATGATTGATTTATTCCAATCATCTCTGTCTGTAGGATGGGATGAAGGTGTGATTGGCATGCAAATTGGTGAAGTTGCTCGTCTTCGGTGCTCTCCTGATTATGCTTATGGTGCTGGTGGCTTTCCTGCTTGGGGAATACAGCCCAACTCTGTCTTGGAATTTGAAATCGAGGTCTTAAGTGCGCAATGA 420 0.4071 MSLFTALVSGKTVTFLRSFGAQRILARTLSHSKLAKVLLSKVYNDNNSILSLFPLFLYLVSSKPAISIQICSKLFHFMIDLFQSSLSVGWDEGVIGMQIGEVARLRCSPDYAYGAGGFPAWGIQPNSVLEFEIEVLSAQ. 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05305 139 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 87 138 - -
Seca5g05305 139 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 85 136 IPR001179 GO:0003755
Seca5g05305 139 SUPERFAMILY FKBP-like 80 137 - -
Seca5g05305 139 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 75 139 IPR001179 GO:0003755
Seca5g05305 139 Gene3D - 47 139 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05305 Seca-Chr5 110027050 110029011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05305 77 137 Calmodulin-binding Proteins AT5G48570 37.705 7.94e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05305 K01802 - gmx:100305505 112.079