Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05277 ATGATGGATATTCAAAGCAGCTCAGAATTGAATGAAACTACACATATGCTTCCACCTCCCCCTGGCACATTTGTAGATCGTGAAGAACTCATCCAGTATGTTGGAGACTTTGCTGTGTCACAAGGATATGTGGTCACTATCAAGCAATCCAAGAGGGACAAAGTAGTTGTACTTGGTTGTGACAGAGGGGGTGTTTATCGCAACCGGCGAAAATCTATTGAGGAGTCCTCAGCTGAACATAGCCGCAAAAGAAAAACTGGTTCACGTCTAACAAATTGTCCTTTTGAAGCTGTGGGCAAGAAGGAAGATGGCTTGTGGGTACTCACCATAAAAAATGGAACACATAATCATGAGCCATTAAGGGACATTTCAGAACATCCTTCTGCTCGTCGCTTCACGGAGAGCGAAGTTTTGCTCATTAAAGAAATGACAGAAGCTGGGTTTAAACCTCGACAAATTCTAAAGAGGCTGAGACAAAGCAATCCAGAACTTTTATCAACCCCAAAGCATGTTTATAATGTTAAAGCTAAGCTTAGACAAGGAAACATGAATGTTAGGAATTTCAAGTCACTGAGACCCGAGAAATCTGCTGTAAGAAATAATTATCTTGCAGTAATTGAACCATCATGGAGGCAGCGCAACCCTCCGAGGGTTCCCAATCTTATTGGAGGCAGATTTGTTGATTCACAGTCATATGAATCAATTGACATTTTAAACCCTGCAAGCCAGCAAGTTGTTTCTCAAGTTCCAATGACTACAGATGAGGAGTTCAAAGCTGCAGTATTTTCAGCAAAACGGGCGTTTTCATCATGGCGTAACATGCCAATTACCACTCGGCAGAGAATCATGTTTAAGTTCCAAGAGCTTATTCATAGGGACATTGATAAGATTGCTATGAATATTAGTACTGAACATGGGAAAACACTGCGAGATGCATATGGTGATGTGTCACGCGGGCTAGAGGTTGTTGAACATGCTTGTGGTATGGCAAATCTGCAAAAGGGGGAATTTGTTCCCAATGTGTCCAATGGAATAGACACATACAGCATTAGAGAGCCTCTTGGTGTTTGTGCTGGTATCTGCCCTTTTGACTTCCCGGCTATGATTCCCTTATGGATGTTTCCTATTGCTGTCACATGTGGCAATACATTTATTCTAAAGCCGTCAGAGAAGGATCCAGGTCTCTTGCAAAACCAATGCTTACATTATGATGAAAGAAAGTTTTTCTATACAACAAATCTCAGTATCCATTATTTTTCTCTTCTAAAGTTAATATGCCATACTGGAAAAAAAAGTGGGGCCCTTGCATTTGAAGCTCCCAACATTTTGGGTAAGCATGATATTCTATTTCTTATAATGTCAGGGGCAGCTATGGTGCTGGCAGAGTTAGCAATAGAGGCTGGTATACCTAATGGCGTGTTGAATATTGTTCATGGTACAAATGACATTGTCAAAGCTATCTGTGATGATGGTGATATAAAAGCTGTCTCCTTTGTTGGTTCAGATACAGTTGGTGCTTATGTATATGCAAGAGCATCTACTAAAGGTAAACGTGTTCAGGTAATTTCTCTGCATCTGCTCTGGTAG 1587 0.4102 MMDIQSSSELNETTHMLPPPPGTFVDREELIQYVGDFAVSQGYVVTIKQSKRDKVVVLGCDRGGVYRNRRKSIEESSAEHSRKRKTGSRLTNCPFEAVGKKEDGLWVLTIKNGTHNHEPLRDISEHPSARRFTESEVLLIKEMTEAGFKPRQILKRLRQSNPELLSTPKHVYNVKAKLRQGNMNVRNFKSLRPEKSAVRNNYLAVIEPSWRQRNPPRVPNLIGGRFVDSQSYESIDILNPASQQVVSQVPMTTDEEFKAAVFSAKRAFSSWRNMPITTRQRIMFKFQELIHRDIDKIAMNISTEHGKTLRDAYGDVSRGLEVVEHACGMANLQKGEFVPNVSNGIDTYSIREPLGVCAGICPFDFPAMIPLWMFPIAVTCGNTFILKPSEKDPGLLQNQCLHYDERKFFYTTNLSIHYFSLLKLICHTGKKSGALAFEAPNILGKHDILFLIMSGAAMVLAELAIEAGIPNGVLNIVHGTNDIVKAICDDGDIKAVSFVGSDTVGAYVYARASTKGKRVQVISLHLLW. 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05277 528 SUPERFAMILY ALDH-like 205 394 IPR016161 GO:0016491
Seca5g05277 528 SUPERFAMILY ALDH-like 454 521 IPR016161 GO:0016491
Seca5g05277 528 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 210 401 IPR016162 GO:0016491
Seca5g05277 528 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 452 524 IPR016162 GO:0016491
Seca5g05277 528 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 53 395 IPR010061 GO:0004491
Seca5g05277 528 MobiDBLite consensus disorder prediction 1 23 - -
Seca5g05277 528 Pfam Aldehyde dehydrogenase family 226 394 IPR015590 GO:0016491
Seca5g05277 528 Pfam Aldehyde dehydrogenase family 456 520 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05277 Seca-Chr5 109835040 109842125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05277 455 520 Aldehyde Dehydrogenase Gene Family AT2G14170 72.727 2.13e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05277 K00140 - jre:108983908 732.635