Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g05199 | ATGAGAGGTTCTACAATCCTTCAATTCTTCTTTTTTTGTACCTTCACTTTACCCGCGTTCTTTTCCGGTATTGTAGTATCCGTGGATACCTTAACTGCAACTCAATCTCTTGGAGCTAACCAAACCCTTGTATCTCCACAACAAGTGTTTGAATTTGGCTTCTTTAATACAAGCAGTTTGAGATGGTACTTGGGTATATGGTACAAGGATTTTCCTGATAAAACAGTAATTTGGGTGGCAAACAGAGACACCCCACTTGAAAATTCCAATGGAACTCTCAAGATTGGAGATAGGGGAAACCTGCTTCTTCTCAATCAAACAGGCAACCCCATATGGTCATCAAATCAAACCACTGCTGTTACAAACCCGGTTCTTAAGCTTTTTGATACTGGGAATTTGATTCTCATGGAAGCAAACGAGAAAGACACCAACAACTATTTATGGCAGAGCTTTGATGATCCAACAGATACTTTGTTACCAGGCATGAAGCTTGGTTGGAACCTAGACACTGGTGTGGAGCGCCGCATAACATCATGGAGAGGCCAAAATGATCCATCAATAGGAGATTCTTATTTCACTCTAAATTACCATGGGATACCAGATATTTTCTTATGGAACAAACAACAAAGGGTGTTCCGAACTGGACCATGGAATGGTGAGAGGTTTGGTGGGGTACCAATACTAAACACAATTGCTGCTCTTAATGATAGTATAGTTGCTGATGAACATCAAGTGTATTACCTCCCTTCAATGCTCAATCAGTCAAGCCTGTCCAGACTTGTTGTGAACTGGACAGGAACAATTGAACGGTATGCATGGATAGAGAGTAGTCAAAGTTGGAGTCAAATATGGATTGCACCAAATGCCGATTGTGATCACTATGGAGCTTGCGGTCCCTTTGGTATATGTGACTCAAATAGTTTCCCAATGTGCCAGTGTATTCAAGGATTCAATGTCAAGGATCAGGGCCAATGGGATTTGAAAAATTTTTCTGATGGGTGTACTAGGAAGACAGAATTGGAATGTGGGAAAGACAAGTTCTTGAACATGACCAATGTGCAATTGCCAGATGCCACAAAGGTGTTTGTGGACAACAACATGACCCTATTGGAATGTAGAAATATGTGCCAGATGAATTGCTCTTGTACTGCCTATGCTAATGCAGAGATTACTAATGGTGGAACTGGTTGCGTGATGTGGGCTGATAATCTCATTGACATGAGGCAGTTTTCTGAAGGTGGTCAAGATCTCTATGTCAAATTAGCAGCTTCTGATGTAGATGACAATGGCACAGGATCTGTTGGTGGCTCTCACAAGAAAAAGAATTCAGGAAAGATTGCAGGAATTACAGTTGCTGTATTTATAGTAATTTTGGGGGTGATTATGTTCATTTTGTGGAAGAAGAGAAAAATTCTGATTATATTGAGCTGGAAAAAGAAGCAGAATGGTAATTCTGAAAGAGGCCAGAAGACGTTGCTACCTGAGGTAATAATACATTCAATAAATAAAGACAATGTAGATGAAAGGAACACAGATGACCTGGAGTTGCCATTGTTTGATTTTAATACCATAACACAAGCTACAAACTACTTCTCTCTAGCAAATAAACTTGGAGAAGGAGGCTTTGGAAGCGTTTACATGGGTAGGCTAGTGGATGGCCAAGAAATTGCTGTGAAAAGGCTATCAACAAGCTCTGGGCAAGGAAATGAGGAGTTCCTGAATGAGGTAAGATCCATTGCAAAGCTTCAACATCGAAATCTTGTACGGCTGTTTGGTTGCTGCATTGAGAAGGAAGAGAAGATGTTGATCTATGAGTACATGGAGAATAAGAGCCTAGATTCTATTTTGTTTGACACAGCAAAGAGTTCCACACTAGACTGGCCAATGCGCTTCAACATTATATGTGGAATAGCCAAAGGGCTTCTTTATCTCCATCATGACTCTAGATTTAGAATTATCCATAGGGATCTCAAGGCAAGCAACATTCTTCTTGATAGAGAAATGAATCCAAAGATATCAGATTTTGGGGTTGCTAGAATTTTTGACACTGATCAAACACATGCAAACACAAGGAGAGTTGTTGGAACATATGGTTATATGTCTCCTGAATACGCAATGGGGGGATTCTTTTCAGTGAAATCTGATGTTTACAGTTTTGGAGTTCTTGTGCTAGAGATCATAAGTGGCAAGAAGAACCGAGGATTTTATTCCTCAGATGACTTAAATCTTATTGGACATGCATGGAGGCTATGGAAAGAAGGGAATGCATTAGAAATAATGGATTCGTCATTTATTGATTCATATTCAGAATCTGAAGTTCTGAGATGCATACATGTTGCGTTCATATGTATCCAAGAACGAGCAGAAGACAGACCCACAATGTCTAATGTGGTGTTAATGTTGAGTAGTGAAAGTGCATCAATGGCAGAGCCTAAACACCCCGGTTTCGTCCTCGGAAGGAGTTCCGGCGAAAGCGACTCTTCTTCGGCTAGGCAAGATGAGTTATACACGATAAACAAAGTCACAGTTACAAGACTAGATGGCAGGTAG | 2550 | 0.4043 | MRGSTILQFFFFCTFTLPAFFSGIVVSVDTLTATQSLGANQTLVSPQQVFEFGFFNTSSLRWYLGIWYKDFPDKTVIWVANRDTPLENSNGTLKIGDRGNLLLLNQTGNPIWSSNQTTAVTNPVLKLFDTGNLILMEANEKDTNNYLWQSFDDPTDTLLPGMKLGWNLDTGVERRITSWRGQNDPSIGDSYFTLNYHGIPDIFLWNKQQRVFRTGPWNGERFGGVPILNTIAALNDSIVADEHQVYYLPSMLNQSSLSRLVVNWTGTIERYAWIESSQSWSQIWIAPNADCDHYGACGPFGICDSNSFPMCQCIQGFNVKDQGQWDLKNFSDGCTRKTELECGKDKFLNMTNVQLPDATKVFVDNNMTLLECRNMCQMNCSCTAYANAEITNGGTGCVMWADNLIDMRQFSEGGQDLYVKLAASDVDDNGTGSVGGSHKKKNSGKIAGITVAVFIVILGVIMFILWKKRKILIILSWKKKQNGNSERGQKTLLPEVIIHSINKDNVDERNTDDLELPLFDFNTITQATNYFSLANKLGEGGFGSVYMGRLVDGQEIAVKRLSTSSGQGNEEFLNEVRSIAKLQHRNLVRLFGCCIEKEEKMLIYEYMENKSLDSILFDTAKSSTLDWPMRFNIICGIAKGLLYLHHDSRFRIIHRDLKASNILLDREMNPKISDFGVARIFDTDQTHANTRRVVGTYGYMSPEYAMGGFFSVKSDVYSFGVLVLEIISGKKNRGFYSSDDLNLIGHAWRLWKEGNALEIMDSSFIDSYSESEVLRCIHVAFICIQERAEDRPTMSNVVLMLSSESASMAEPKHPGFVLGRSSGESDSSSARQDELYTINKVTVTRLDGR. | 850 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g05199 | 849 | SUPERFAMILY | Protein kinase-like (PK-like) | 514 | 801 | IPR011009 | - | |
Seca5g05199 | 849 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 607 | 809 | - | - | |
Seca5g05199 | 849 | MobiDBLite | consensus disorder prediction | 811 | 833 | - | - | |
Seca5g05199 | 849 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 496 | 606 | - | - | |
Seca5g05199 | 849 | Pfam | D-mannose binding lectin | 75 | 180 | IPR001480 | - | |
Seca5g05199 | 849 | Pfam | S-locus glycoprotein domain | 212 | 320 | IPR000858 | GO:0048544 | |
Seca5g05199 | 849 | Gene3D | Transferase(Phosphotransferase) domain 1 | 607 | 813 | - | - | |
Seca5g05199 | 849 | Pfam | Domain of unknown function (DUF3403) | 803 | 849 | IPR021820 | GO:0004674 | |
Seca5g05199 | 849 | ProSitePatterns | Protein kinases ATP-binding region signature. | 537 | 559 | IPR017441 | GO:0005524 | |
Seca5g05199 | 849 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 24 | 151 | - | - | |
Seca5g05199 | 849 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 652 | 664 | IPR008271 | GO:0004672|GO:0006468 | |
Seca5g05199 | 849 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 76 | 185 | IPR036426 | - | |
Seca5g05199 | 849 | Pfam | PAN-like domain | 342 | 407 | IPR003609 | - | |
Seca5g05199 | 849 | Gene3D | Phosphorylase Kinase; domain 1 | 504 | 606 | - | - | |
Seca5g05199 | 849 | CDD | B_lectin | 34 | 154 | IPR001480 | - | |
Seca5g05199 | 849 | SMART | serkin_6 | 531 | 801 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g05199 | 849 | SMART | ntp_6 | 342 | 421 | IPR003609 | - | |
Seca5g05199 | 849 | ProSiteProfiles | Bulb-type lectin domain profile. | 28 | 148 | IPR001480 | - | |
Seca5g05199 | 849 | PIRSF | SRK | 2 | 849 | IPR024171 | GO:0004674 | |
Seca5g05199 | 849 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 19 | 792 | - | - | |
Seca5g05199 | 849 | CDD | STKc_IRAK | 537 | 801 | - | - | |
Seca5g05199 | 849 | SMART | blect_4 | 34 | 154 | IPR001480 | - | |
Seca5g05199 | 849 | Pfam | Protein tyrosine and serine/threonine kinase | 533 | 799 | IPR001245 | GO:0004672|GO:0006468 | |
Seca5g05199 | 849 | Gene3D | - | 24 | 151 | IPR036426 | - | |
Seca5g05199 | 849 | CDD | PAN_AP_plant | 338 | 422 | - | - | |
Seca5g05199 | 849 | ProSiteProfiles | Protein kinase domain profile. | 531 | 816 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g05199 | 849 | ProSiteProfiles | PAN/Apple domain profile. | 342 | 422 | IPR003609 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g05199 | Seca-Chr5 | 109143608 | 109146912 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g05199 | 439 | 816 | Receptor kinase-like Gene Family | AT4G23190 | 52.083 | 5.39e-130 | 400 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Seca5g05199 | PK_Tyr_Ser-Thr | 5.2e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g05199 | - | - | aip:107621503 | 1151.73 |