Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g05193 | ATGAATGGACAAAAAGAGATCCTGTGGTCAACAAATGTGTCCAACATTTCATCTAACACAACAGCTCTGCTTCTGGACACTGGCAATCTTGTTCTGCAAGAAAGTGCTACAGGAAAGATGGTATGGCAGAGTTTCCAACACCCTTGCAATACATTGTTGGATAAAATGAAACTTGTTTCGAATAAAACTAGAATGAAAATAACCTCATGGAAAAGTCCTCAGGATCCATCCATTGGTAACTTCTCTCTAAGTCTTGAACACCTAGAGATTCCTGAAGTTTTCACCTGGAGAGGAAGTCAACTATACTGGCGAAGTGGTCCATGGAATGGTCAGATCTTTCTTGGGACACCAGACATGAGCAATAATTATCTTGATGGATTTTACTTAGGTGGGAAAGGTGAAGGGGATGACAATTATTATCTCACTTATACCTCTGCAAATCAGTCTCAATTGATAATGTTTGTATTGAGTACTGAAGGAGGTATAGACCAATTATATTGGGATTATGAAAGGAGACATTGGTCAATCATGTGGTCAGTTCCAAAATCTGAGTGTGATGTTTATGGCATATGTGGAGCATTTGGAAGCTGTGACTCTACAAGTTCACCTATCTGCAGCTGTTTGCAAGGATTTGAGCCAAGGAATCCAGAGGAATGGAAGAGACAGAATTGGACTAGTGGATGTGTTAGGAAGGAACCACTGCAGTGTGAGAGAGTCAAAAATGGGAGTGAAGCTCAAGCTGACAATAGGGATGGCTTTCTGAAGCTGCAGAATACCAAAGTTCCAGACTTTGTCCAATGGTCATCTTCCCTTTATGATGATTGTAGAACTCAGTGCTTGCAAAACTGCTCTTGTTTAGCATATGCGTATGATGCAGGCATTGGTTGTATGTTATGGAGTGGAGACTTGATTGACATACAGAGGTTCTCAGCTGGAGGAACTGATCTTTACATTCGGGTTCCCTATTCCGAACTTGATGAAAAGAAGAAGAGTGCCACAGTGATCATTGCAGTTACAGTCACAATAGGAACAATTATCATTTTGACATGTGGATATGTCTTGTGGAAAAAGAAAATAAATCTGAAAATTCAGAGTCACAGAAGCCAGGTAAATGACCCTAGTAAATTTAAACTCCCGGAGCTTTCCCAATTTGAATTTGAAAAGATTGCTACTGCAACAAACAACTTTCACCTAAATAATAAGCTAGGGCAAGGTGGTTTTGGACCAGTATACAAGGGTACATTGGAAGATGGACAGGAAATAGCTGTTAAAAGACTTTCAAGAACATCTGGACAAGGGCTAGAAGAATTTATGAATGAGGTTTTGGTAATATCAAAGCTTCAACATCGTAACCTTGTCAGACTTCTTGGATGTTGCATTGAAGGAGATGAAAAGATTTTGATCTATGAGTACATGCCAAACAGAAGTTTGGATGCATATATGTTTGATCCATTTAAACAAGTACTGAATTGGGAAAAACGTTTTTATATAATTGAAGGAATTGCCCGGGGTCTACTTTACCTTCATAGAGACTCAAGACTCAGAATTATCCATAGGGACCTAAAGTTAAGTAATATATTGTTGGATGAAGAGCTGAATCCAAAAATATCAGACTTTGGTATGGCAAGGATTTTTGGTCACAGTGAAGATGAGGCCAATACTAGAAGGGTTGTTGGAACATATGGTTATTTGTCTCCGGAATATGCCATGGAAGGACTATTTTCAGAGAAGTCTGATGTCTTTAGCTTTGGTGTTTTACTGCTGGAGATTGTCAGCAGGAGGAAAAACACCAGCTTTTATAAGGATGCTGAAACTTTGAGTCTTTTAGGATTTGCATGGAAGTTGTGGAATGAGGACAACATCACATCTCTAATAGATCCAGAAATATCAAATCAAAGCTTCCATGCAGATATTATTAGATGCATACATATTGGCCTTCTGTGTGTGCAGGAACTTGCAAGAGACAGGCCTACAATGACTACAGTAATTTCAATGCTTAGCAATGAGACTGTTTACCTTCCCACCCCAAGACGGCCAGCATTCATTCAAAGGCAGACCATGTTGGATGTAGAGTGCTCTCCTAAAAATGATGTATTGTGCTCCATCAATTATGATGGAAATCTTGTTCTGATGAATGGACAAGAAGAGATCCTTTGGTCAACAAATGTGTCCAATGTTGCATCTAATGCAACGGCTCTGCTTCAAAATACTGGCAATCTTGTGTTGCAAGAAAGCACTACAGGAAGGATGGTGTGGCAAAGTTTCCAACACCCTTGTAATACATTGTTAGAGACAATGAAACTTAGTGCGAATAAAACTAGTGGTGAGCGAATGAAACTCACCTCATGGAGAAATACTCAGGATCCATCCATTGGAAACTTCTATTCACGCCTTGAACGCCTAGAAATTCCTGAAATTTTCACCTGGAGAGGAAACCAACCATACTGGCGAAGTGGTCCATGGAATGGTAATATCTTTCTTGGGACACCTAACATGAATAATAATTATCTTGATGGATTTTACTTAGGTGGGCAAGGTGAAGGGGATGAAAATTATTATCTCACTTTTACCTATGCAAAGCAGTCCCAGTTGATGATATATGTGTTGAACAGTCAAGGAGATATAGACGAATGGTTTTGGGATCATGCAAAGAGACATTGGTATATCCAGTGGTCAGTTCCAAAATCTGAGTGTGATGTTTATGGCATATGTGGAGTATTTGGAAGCTGTGATTCTAGAAGTTCTCCTATCTGCAGCTGTTTGAAAGGATATGAGCCAAGGGATCCAGAGGAATGGAATAGACAGAACTGGACCAGTGGATGTGTTAGGAAGGAACCTCTGCAGTGCAAGAGAGATGGATTTCTGAAGCTGCAGAACACCAAAGTTCCAGACTTTGTCCAATGGTCTTCTTCTCATTATGATGATTGTAGAATTGAGTGCTTGCACAACTGTTCTTGTTTAGCATATGCTTATGATGCAGGCATTGGTTGTATGTTTTGGAGTTCAAACTTAACTGACATACAGAGGTTCTCAACTGGAGGAACTGATCTTTACATTCGAGTTCCCTATTCAGAACTTGATGAAAAGAAAAAGAATGCCACAGTGATCATCGTAGTTGCAATCATAATAGGAACAATTCTCATGGTCATGTGTGGATGTGTCTTGTGGAAAAAAAAGAGAAAAAATCTAAAAAATCAGAACAGAATCCAAGTAAATGATCTGAGTAAATTTCAACTGCCTGAGCTTTCCCACTTTGAGTTTGAAAAGCTTGTTATTGCAACAAACAACTTCCACTCAGATAATAAGTTAGGACAAGGTGGTTTTGGACCTGTATATAAGGGTACATTGGAAGATGGACAGGAAATAGCAGTTAAAAGACTTTCAAGAACATCTGGACAAGGGCTAGAAGAATTTATGAATGAGGTTGTGGTAATATCAAAGCTTCAACATCGTAACCTTGTCAGACTTCTTGGATGTTGCATTGAAGGAGATGAAAAGATTTTGATCTATGAGTACATGCCAAACAGAAGTTTGGATGCACATATGTTTGATCCATCTGAGCAAGTACTAAATTGGGAAAAACGTTTTAATATAATTGAAGGAATTGCTCGGGGTCTACTTTACCTTCATAAAGACTCTAGACTAAGAATTATCCATAGAGACCTTAAGTTAAGTAATATATTGCTGGATGGAGAGCTTAGCCCAAAAATATCAGATTTTGGTATGGCAAGAATTTTTGGTTACAGTGAAGATGAGGCCAATACTAGAAGGATTGTTGGAACGTATGGTTATATGTCTCCAGAATATGCCATGGAAGGGCTATTTTCAGAGAAGTCTGATGTCTTTAGCTTTGGTGTTTTACTGCTGGAAATTATCAGCAGGAGAAAAAATACCAGCTTTTATGAGGATGCTGAATCTTTGAGCCTTTTAGGATTTGCATGGAAATTGTGGAATGATAACAACATTACATCTCTAATAGATCCAGAAATGTCAGATCCAAGCTTTCATGCAGATATTATTATTAGATGCATACATATTGGTCTTTTGTGTGTACAAGAACTTGCAAGAGACAGGCCTACGATGACTTCAGTAATTTGGATGCTTAGCAATGAGACTGTTAATCTTCCTTCCCCAACGCAGCCAGGATTTGTTCAAAGACAGACCATGTTACATGCAGAGTGCTCTCGTAGAAATGATGGATTGGGCTCCATCAATTATGTGAGTGTAACAAGTATCCATGGAAGATAG | 4248 | 0.3896 | MNGQKEILWSTNVSNISSNTTALLLDTGNLVLQESATGKMVWQSFQHPCNTLLDKMKLVSNKTRMKITSWKSPQDPSIGNFSLSLEHLEIPEVFTWRGSQLYWRSGPWNGQIFLGTPDMSNNYLDGFYLGGKGEGDDNYYLTYTSANQSQLIMFVLSTEGGIDQLYWDYERRHWSIMWSVPKSECDVYGICGAFGSCDSTSSPICSCLQGFEPRNPEEWKRQNWTSGCVRKEPLQCERVKNGSEAQADNRDGFLKLQNTKVPDFVQWSSSLYDDCRTQCLQNCSCLAYAYDAGIGCMLWSGDLIDIQRFSAGGTDLYIRVPYSELDEKKKSATVIIAVTVTIGTIIILTCGYVLWKKKINLKIQSHRSQVNDPSKFKLPELSQFEFEKIATATNNFHLNNKLGQGGFGPVYKGTLEDGQEIAVKRLSRTSGQGLEEFMNEVLVISKLQHRNLVRLLGCCIEGDEKILIYEYMPNRSLDAYMFDPFKQVLNWEKRFYIIEGIARGLLYLHRDSRLRIIHRDLKLSNILLDEELNPKISDFGMARIFGHSEDEANTRRVVGTYGYLSPEYAMEGLFSEKSDVFSFGVLLLEIVSRRKNTSFYKDAETLSLLGFAWKLWNEDNITSLIDPEISNQSFHADIIRCIHIGLLCVQELARDRPTMTTVISMLSNETVYLPTPRRPAFIQRQTMLDVECSPKNDVLCSINYDGNLVLMNGQEEILWSTNVSNVASNATALLQNTGNLVLQESTTGRMVWQSFQHPCNTLLETMKLSANKTSGERMKLTSWRNTQDPSIGNFYSRLERLEIPEIFTWRGNQPYWRSGPWNGNIFLGTPNMNNNYLDGFYLGGQGEGDENYYLTFTYAKQSQLMIYVLNSQGDIDEWFWDHAKRHWYIQWSVPKSECDVYGICGVFGSCDSRSSPICSCLKGYEPRDPEEWNRQNWTSGCVRKEPLQCKRDGFLKLQNTKVPDFVQWSSSHYDDCRIECLHNCSCLAYAYDAGIGCMFWSSNLTDIQRFSTGGTDLYIRVPYSELDEKKKNATVIIVVAIIIGTILMVMCGCVLWKKKRKNLKNQNRIQVNDLSKFQLPELSHFEFEKLVIATNNFHSDNKLGQGGFGPVYKGTLEDGQEIAVKRLSRTSGQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGDEKILIYEYMPNRSLDAHMFDPSEQVLNWEKRFNIIEGIARGLLYLHKDSRLRIIHRDLKLSNILLDGELSPKISDFGMARIFGYSEDEANTRRIVGTYGYMSPEYAMEGLFSEKSDVFSFGVLLLEIISRRKNTSFYEDAESLSLLGFAWKLWNDNNITSLIDPEMSDPSFHADIIIRCIHIGLLCVQELARDRPTMTSVIWMLSNETVNLPSPTQPGFVQRQTMLHAECSRRNDGLGSINYVSVTSIHGR. | 1416 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g05193 | 1415 | ProSiteProfiles | EGF-like domain profile. | 181 | 217 | IPR000742 | - | |
Seca5g05193 | 1415 | Gene3D | Phosphorylase Kinase; domain 1 | 1056 | 1172 | - | - | |
Seca5g05193 | 1415 | Gene3D | Phosphorylase Kinase; domain 1 | 356 | 471 | - | - | |
Seca5g05193 | 1415 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 698 | 1358 | - | - | |
Seca5g05193 | 1415 | Pfam | Protein tyrosine and serine/threonine kinase | 397 | 665 | IPR001245 | GO:0004672|GO:0006468 | |
Seca5g05193 | 1415 | Pfam | Protein tyrosine and serine/threonine kinase | 1099 | 1365 | IPR001245 | GO:0004672|GO:0006468 | |
Seca5g05193 | 1415 | ProSiteProfiles | Bulb-type lectin domain profile. | 644 | 755 | IPR001480 | - | |
Seca5g05193 | 1415 | SUPERFAMILY | Protein kinase-like (PK-like) | 379 | 666 | IPR011009 | - | |
Seca5g05193 | 1415 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 360 | 471 | - | - | |
Seca5g05193 | 1415 | CDD | PAN_AP_plant | 946 | 1022 | - | - | |
Seca5g05193 | 1415 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 1173 | 1376 | - | - | |
Seca5g05193 | 1415 | SUPERFAMILY | Protein kinase-like (PK-like) | 1079 | 1368 | IPR011009 | - | |
Seca5g05193 | 1415 | Pfam | S-locus glycoprotein domain | 103 | 214 | IPR000858 | GO:0048544 | |
Seca5g05193 | 1415 | Pfam | S-locus glycoprotein domain | 816 | 927 | IPR000858 | GO:0048544 | |
Seca5g05193 | 1415 | ProSiteProfiles | Bulb-type lectin domain profile. | 1 | 45 | IPR001480 | - | |
Seca5g05193 | 1415 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1217 | 1229 | IPR008271 | GO:0004672|GO:0006468 | |
Seca5g05193 | 1415 | CDD | PAN_AP_plant | 233 | 321 | - | - | |
Seca5g05193 | 1415 | Pfam | D-mannose binding lectin | 699 | 784 | IPR001480 | - | |
Seca5g05193 | 1415 | Pfam | D-mannose binding lectin | 2 | 71 | IPR001480 | - | |
Seca5g05193 | 1415 | ProSiteProfiles | PAN/Apple domain profile. | 949 | 1022 | IPR003609 | - | |
Seca5g05193 | 1415 | SMART | ntp_6 | 949 | 1021 | IPR003609 | - | |
Seca5g05193 | 1415 | SMART | ntp_6 | 248 | 320 | IPR003609 | - | |
Seca5g05193 | 1415 | ProSiteProfiles | Protein kinase domain profile. | 396 | 673 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g05193 | 1415 | ProSiteProfiles | Protein kinase domain profile. | 1097 | 1373 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g05193 | 1415 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 1057 | 1172 | - | - | |
Seca5g05193 | 1415 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 472 | 674 | - | - | |
Seca5g05193 | 1415 | Pfam | PAN-like domain | 248 | 306 | IPR003609 | - | |
Seca5g05193 | 1415 | Pfam | PAN-like domain | 949 | 1007 | IPR003609 | - | |
Seca5g05193 | 1415 | CDD | STKc_IRAK | 1103 | 1368 | - | - | |
Seca5g05193 | 1415 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 698 | 822 | IPR036426 | - | |
Seca5g05193 | 1415 | SMART | serkin_6 | 1097 | 1361 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g05193 | 1415 | SMART | serkin_6 | 396 | 673 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g05193 | 1415 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 516 | 528 | IPR008271 | GO:0004672|GO:0006468 | |
Seca5g05193 | 1415 | CDD | STKc_IRAK | 402 | 666 | - | - | |
Seca5g05193 | 1415 | Gene3D | - | 669 | 756 | IPR036426 | - | |
Seca5g05193 | 1415 | Gene3D | - | 1 | 46 | IPR036426 | - | |
Seca5g05193 | 1415 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1173 | 1377 | - | - | |
Seca5g05193 | 1415 | Gene3D | Transferase(Phosphotransferase) domain 1 | 472 | 668 | - | - | |
Seca5g05193 | 1415 | ProSiteProfiles | EGF-like domain profile. | 894 | 930 | IPR000742 | - | |
Seca5g05193 | 1415 | ProSiteProfiles | PAN/Apple domain profile. | 236 | 321 | IPR003609 | - | |
Seca5g05193 | 1415 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 4 | 109 | IPR036426 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g05193 | Seca-Chr5 | 109082802 | 109094693 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g05193 | 331 | 681 | Receptor kinase-like Gene Family | AT4G23230 | 52.975 | 1.22e-118 | 384 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Seca5g05193 | PK_Tyr_Ser-Thr | 8.9e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g05193 | - | - | gab:108462278 | 1464.13 |