Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05182 ATGGAGAACGCAACGATGATAGGACCGGCGAACATGACAGACAAATCAATAATTTGCTACACACCAACCATGACAACAACAAATGGTATATGGCAGGGAGATAACCCTTTAGATTTCACCCTCCCTCTCTTCATCGTCCAATTAACCCTAGTCGTTACTGCCACACGTTTCTTTGTTTTCATCCTCAAGCCCTTTCACCAACCCCGTGTCATTGCTGAAATCATGGGTGGATTGCTGTTGGGCCCATCAGTGCTTGGTAAGAATCAAAGATTTGCCAACAATGTATTCCCTCTAAAGAGTGCCATGGTGATTGAAACAATGGCAAACATAGGCCTCATATACTTCCTCTTCCTAGTTGGGTTAGAGATGGACATAGCGATTGTCACACGCACTGGGAAGAAGGCAGTGACCATAGCCATTGCTGGTATGATATTGCCCTTTATTGCTGGTGTTGGCTCCTCCTTTTACTTAGATGTCAAAGACAGAGACAAAAATATAATCGAAAGCAGCTATGTCGTTTATCTTGGTATTGTTTTATCTGTCACTGCATTCCCAGTGCTTGCTCGCATGCTTGCTGAGCTTAAGCTCATCAACACAGAGCTTGGCAAGCTTGCACTCTCAACTTCCCTCATCAATGATGTTTGTGCCTGGCTGTTGCTCGCTCTAGCTATTGCTTTATCAGAGCAAACGTCTAACACCTTCGCCTCTGTATGGGTTGTGATATCAAATCTTGTTTTTGTTGCTTTCTGCTTTCTTGTTGTTAGGCCAGCAGTCTCCTGGTTGATCAAGAGAACCCCAGAAGGAAAACCCTTCAGTGAGTTCCAAATATGCATTGTGCTCACTGGTGTTATGATCTCAGCCTTCATCACAGATGTCCTCGGAACACATTCTGTTTTTGGAGCTTTTGTATATGGCCTAGTGATTCCAAATGGCCCACTTGGAGCTGCTATAATAGAAAAGCTAGAAGACTTTGTTTCCGGGCTTTTACTCCCTCTCTTTTATGCTATTAGTGGTCTTAAGACTGATATCAACTTAATCACTAAAGGTGGTTCATGGACATTTGTATTCTTGGTGATTCCTCTTTCTTGTTTTGGCAAGATCGTCGGAACTCTTATTGTTTCACTCCTTTTCCAGATACCAACCCGTGATAGTATTGTTCTTGGTTTACTTATGAACACTAAAGGCCTTATTGAAATGATTGTGCTCAATATTGGGAGGGAGCAAAAGGTCTTGGATGATGAAGTATTCTCAATTATGGTTATTGTAACCCTCATAATGACAGCAGTCATTTCACCCGTTGTAACATTAATTTATAAGCCAAGGAAAAGGCTCATACCTTACAAAAAGAGAACAGTGCAAAGTTCAAGACTTGATGCAGAGTTACGGGTGCTTGTGTGTATACATTCCCCTAGAAATGTGCCTACAATAATCAATCTCCTTGAAGCAACCCACCCCAGCAAAAGGTCTCCCATATGTGCTTATGTGCTCCACTTAGTTGAGCTCACTGGTAGAGCTTCTGCCATGCTCATTGTCCATGCTAATCGACTATCAGGTGGCCCAGCCCTCAATAAAACACAAGCACAAACTGACCATATTATCACTGCATTTCAGAACTTTGAGGAACATGTTGGTTATGTCTCAGTCCAACCCTTAACAGCTATTTCCCCTTACTCTTCCATGCATGAAGACATATGCACTTTGGCAGAGGAGAAAAGGGTATCCATCATCATCATCCCTTTCCATAAGCAACAGACAGTTGATGGAGAAATGCAAGACACAAATCCAGCATTCAGAATGGTGAACCACAATTTATTACAGAGTTCTCCTTGCTCACTTGGGATACTTGTCGATAGAGGCCTTAATGGATCCAACCGCTTAATTGCAAATCAAGCATCTCATCAGGTGGCTGTGTTATTTTTTGGAGGACCAGATGATAGGGAGGCACTATCCTATGGATGGAGAATGTCAAGGAATCCAAGGGTTAACCTCACTGTCATGCATTTCATTCCAGGCTATGAGAAGACTGAGGCTGAGCTAGATGATCAAAGAACAACCATCACAAATGATGGGTGGGAAAATGAACTGGATGAGGAGTATATACATGAGTTCAAGATGATAGCTGCAACTGATGACTCAATTGTTTATATAGAGAACGTTGTAAGTAATGGGGAGGAAACAGTAGCTGCAATAAGATCAATGAACAATGTGAATGACCTCTTCATAGTTGGGAGAGGTCAAGGGACAACGTCACCACTAACAGATGGCCTAACAGATTGGAGTGAATGCCCGGAGTTGGGAGCCATTGGGGATTTGCTAGCTTCTTCAGACTTTGAAACAACAGCTTCAGTGTTGGTGATGCATCAATATGTTGCACAAGGGCCAGATGGGGAGGATATTTTTGTATCTGAAAGACCATGGCAAACAAGTGAAAACTATCATGCCATGAAACAACATATGGGAAGATATACAACAGTGCCAAGGGGGTCAGTTCTTTTATAA 2499 0.425 MENATMIGPANMTDKSIICYTPTMTTTNGIWQGDNPLDFTLPLFIVQLTLVVTATRFFVFILKPFHQPRVIAEIMGGLLLGPSVLGKNQRFANNVFPLKSAMVIETMANIGLIYFLFLVGLEMDIAIVTRTGKKAVTIAIAGMILPFIAGVGSSFYLDVKDRDKNIIESSYVVYLGIVLSVTAFPVLARMLAELKLINTELGKLALSTSLINDVCAWLLLALAIALSEQTSNTFASVWVVISNLVFVAFCFLVVRPAVSWLIKRTPEGKPFSEFQICIVLTGVMISAFITDVLGTHSVFGAFVYGLVIPNGPLGAAIIEKLEDFVSGLLLPLFYAISGLKTDINLITKGGSWTFVFLVIPLSCFGKIVGTLIVSLLFQIPTRDSIVLGLLMNTKGLIEMIVLNIGREQKVLDDEVFSIMVIVTLIMTAVISPVVTLIYKPRKRLIPYKKRTVQSSRLDAELRVLVCIHSPRNVPTIINLLEATHPSKRSPICAYVLHLVELTGRASAMLIVHANRLSGGPALNKTQAQTDHIITAFQNFEEHVGYVSVQPLTAISPYSSMHEDICTLAEEKRVSIIIIPFHKQQTVDGEMQDTNPAFRMVNHNLLQSSPCSLGILVDRGLNGSNRLIANQASHQVAVLFFGGPDDREALSYGWRMSRNPRVNLTVMHFIPGYEKTEAELDDQRTTITNDGWENELDEEYIHEFKMIAATDDSIVYIENVVSNGEETVAAIRSMNNVNDLFIVGRGQGTTSPLTDGLTDWSECPELGAIGDLLASSDFETTASVLVMHQYVAQGPDGEDIFVSERPWQTSENYHAMKQHMGRYTTVPRGSVLL. 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05182 832 Gene3D - 43 444 IPR038770 -
Seca5g05182 832 PANTHER CATION/H + ANTIPORTER 16 790 - -
Seca5g05182 832 Pfam Sodium/hydrogen exchanger family 51 435 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca5g05182 832 FunFam Cation/H(+) antiporter 15 43 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05182 Seca-Chr5 109010049 109013153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05182 13 810 Antiporter Super Family AT2G13620 64.851 0.0 1068
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05182 K26731 - gmx:100800514 1307.74