LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca5g05161	ATGCAAACGAGGTATATGGAGAGATCGAGCAGTATGGCGAGGGAGAAGCGAAGCTTAGATTCAAGTACAAGTGAGGAAGACCAGCCTGAAAGGAAACGACCTGCCTTGGCTAGTGTAATTGTTGAAGCCCTGAAGGTGGACAGTCTGCAGAAGCTTTGCTCATCATTGGAGCCTATTCTACGAAGAGTTGTTAGTGAAGAAGTGGAGCGTGCTTTAGCAAAATTAGGCCCTGCCAAGCTTAGTGGGAGGTCTTCTCCTAAGCGCATAGAAGGCCCTGATGGCAACAATTTACAATTACAATTCAAGACCAGGTTATCCCTTCCCCTCTTTACTGGTGGGAAAGTGGAGGGAGAGCAGGGCACTGCCATACATATTGTTTTAATTGATGCAAACACCGGCCATGTTGTCACATCTGGCCCAGCATCATGTGTCAAACTAGATGTTATTGTACTTGAAGGGGATTTCAATAATGAGGATGATGATAGTTGGAGTGAAGGAGAATTTGAGAGCCATGTTGTGAAAGAGCGAGAAGGAAAAAGACCTCTCCTCACTGGTGATCTGCAAGTGACACTAAAGGAGGGTGTTGGAACACTGGGTGATCTTACATTTACAGACAACTCTAGCTGGATAAGGAGTAGGAAGTTCCGGCTGGGGCTCAAAGTTTCCTCAGGTTGTTGTGAGGGAATGCGTATTCGTGAAGCCAAAACAGAGGCTTTCACTGTTAAGGATCACCGTGGAGAATTATACAAGAAACACTACCCACCAGCCTTGAATGATGAGGTCTGGAGACTGGAGAAGATTGGCAAGGATGGGTCCTTTCACAAAAGGCTAACAAAAGCTGGAATATATACTGTTGAAGATGTCTTACGACTTGTGGTGAGAGACCCACAGAGACTGCGGAATATTCTTGGGAGCGGCATGTCAAATAAAATGTGGGATGTTCTTGTTGAGCATGCAAAGACTTGTGTTCTCAGCGGAAAACTCTATGTATACTACCCTGATGATGCAAGGAATATTGGTGTTGTTTTCAATAACATTTATGAGTTGAGTGGCTTAATCACCAATGAACAATATTACTCTGCTGATTCTCTCTCTGACAGTCAAAGGGTTTATGTGGACACTTTGGTGAAGAAGGCATATGAGAATTGGATGCATGTTATTGAGTATGATGGCAAGTCTCTGCTAAATTACAATCAGAATAAGACTTTGGCCACCTCCCAACCTCAGGCTCCAGTGGGTTCCCATAATTATTCAAACTCACTTGATCAGCAGATCTCCATCCCAAGTCTACCAGTTCCTGTACACACAGGGCAGGCTTCAATGGATCCTGGAGTATCAGTTGGAGGTTATCACGATGGTACAAATACCAGATTCTCAATGCAACAACAGAATGCTAATCTTAATTCTTCTATTCAGTTTGATAATACTGCATTCCCACTACAAAACCAACTGATAAGTGCTTCACACCAATCTCAACTTCCAAGAAATGAGAATGAGCTGACTCTTGGTCCACCACAACCAGCCACTCCTGGTTTTCAGACTGTCAGCATTTCAAATCCTACTTATAGAGGATTTGAAGATTTCTTCCCAGAAGAAGAGATTCGTATTAGAAGTCACGAGATGCTAGAAAATGAAGATATGCAGCATCTGCTCCGAATTTTTAATATGGGAGGGCAATCTCATGCTCCCTTTAATGCTCCTGAAGATGGATACCCTTATTCATCTGCTTACATGCCTGCAACTTCCACGAACTACAACTTAGATGATGAGCGAAGCCGTTCCTCAGGTAAGGCTGTTGTTGGGTGGCTCAAGCTTAAGGCAGCTCTGAGATGGGGCATTTTTATTCGGAAGAAGGCTGCTGAGAGACGGGCACAACTTGTTGAGCTGGATGACTCATAG	1899	0.4402	MQTRYMERSSSMAREKRSLDSSTSEEDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLSGRSSPKRIEGPDGNNLQLQFKTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTSGPASCVKLDVIVLEGDFNNEDDDSWSEGEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVSSGCCEGMRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLTKAGIYTVEDVLRLVVRDPQRLRNILGSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDDARNIGVVFNNIYELSGLITNEQYYSADSLSDSQRVYVDTLVKKAYENWMHVIEYDGKSLLNYNQNKTLATSQPQAPVGSHNYSNSLDQQISIPSLPVPVHTGQASMDPGVSVGGYHDGTNTRFSMQQQNANLNSSIQFDNTAFPLQNQLISASHQSQLPRNENELTLGPPQPATPGFQTVSISNPTYRGFEDFFPEEEIRIRSHEMLENEDMQHLLRIFNMGGQSHAPFNAPEDGYPYSSAYMPATSTNYNLDDERSRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDDS.	633

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca5g05161	632	PANTHER	OS02G0177800 PROTEIN	13	547	IPR012416	GO:0005516
	Seca5g05161	632	MobiDBLite	consensus disorder prediction	1	34	-	-
	Seca5g05161	632	Pfam	Calmodulin binding protein central domain	256	322	IPR046830	-
	Seca5g05161	632	Pfam	Calmodulin binding protein-like N-terminal domain	97	244	IPR046831	-
	Seca5g05161	632	MobiDBLite	consensus disorder prediction	9	33	-	-
	Seca5g05161	632	Pfam	Calmodulin binding protein C-terminal domain	327	389	IPR046829	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca5g05161	Seca-Chr5	108832130	108839604	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca5g05161	9	627	Calmodulin-binding Proteins	AT5G57580	63.060	0.0	785

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca5g05161	-		-	gmx:100802994	1108.98