Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g05080 | ATGGTTAGAGCTTTCGAAGTCGGAGCTGTTCCTTTCAATCCCGACGGTTGGGGTCCATTGGACTCCACCGCCGGCGGAGCCACCACCAACAATCTGCCACTCAATGTCCCCTTCGCCCCCTTCTCCCGCTCCGACAAGCTGGGTCGGATCGCCGATTGGACTCGCAACTTCAACAACCCCACCCGCCCCAAGAACCCTGCCGACTCCGCATTCGACTTCACCAACGACGACTCCTTCCCTGCCTCCGCCGATGACGACTCCTCCTTCCGCCTCGTCGACGGCAAGCCCCCTCCGCGCCCCAAATTCGGTCCCAAATGGCGCTTCCAGCAGCAACGCCAGCTTCCCCAGCGCCGTGACGAGGAGGTTGAGGCCCGTAAGCGCGAGGCGGAGAAGGAGAGAGCCCGCCGCGATCGTCTTTACCACCTTAACCGTTCAAACCCTAACGCTCCACGCCGCGAAGCCGCAGTTTTCAAATCCTCTGTGGATATCCAACCCGAGTGGAATATGCACGATCAGATCCCCTTCGCTACCTTCTCCAAGCTCTCCTTCAACGTCCCCGAACCCGAAGATCTTCTCCTCTGTGGTGCTCTCGAATACTACGATCGCTCCTATGATCGTATCACTCCTAAGAACGAGCGCCGCCTCGAGAGGTTCAAGAATCGCAACTTCTTTAAGGTTACCACCACTGATGACCCCGTTATTAGGAGGCTCGCCAATGAAGACAAAGCTACTGTTTTTGCCACTGACACTATTCTCTCCACTCTCATGTGCGCCCCCAGGTCTGTTTACTCGTGGGATATTGTTGTTCAGCGTGTTGGGAACAAACTTTTCTTCGATAAGAGAGATGGGTCACAGTTGGATTTGCTCTCTGTTCACGAGACCTCGCAGGAGCCCTTGCCTGAGGCTAAGGATGATATTAACTCTGCTCATTCCTTGAGCGTTGAGGCGGCTTATATCAATCAGAATTTCTCCCAGCAAGTGTTGATCAGGGATGGGAACAAGGTCACTTTTGATGAGCCTAATCCTTTTGCTAATGAGGGTGAGGAGGTTGCTTCTGTAGCTTATAGGTATAGGAGGTGGAAGCTGGATGATGATATGTATCTCGTTGCGAGATGTGAGGTGCAGAGTGTTGTTGATGTGAACAAGCAAAGGTCGTTCCTCACTTTGAATGCTTTGAATGAGTTTGACCCCAAGTATTCTGGTGTTGACTGGAGGCAGAAGTTGGAGACACAGAGGGGTGCTGTGTTGGCCACTGAGCTCAAGAATAATGCAAATAAGTTGGCTAAATGGACTGCCCAAGCTCTGTTGGCAAGTGCGGATATGATGAAGCTGGGATATGTGTCTCGTATTCATCCCCGTGACCATTTTAATCATGTGATTTTGGCTGTGGTTGGATACAAACCCAGGGACTTTGCAGCACAAATTAATTTGAACACTACCAATATGTGGGGAATTGTGAAGTCTATTGTGGACTTGTGCATGAAATTGAATGAGGGGAAATATGTTCTTGTGAAGGATCCAGCCAAGCCCCAGGTTAGGATTTATGAGGTTCCAGCAGATGCATTTGAAAACGACTATGTGGAGGAGCCACTTCCTGAGGAGGAGCAAGTTCAACCTCCAGCAGAGGGTGCTGATGGTGGAGAGGCAGCTGCTACTACGAATGATGTGGAAGATAAGCAGATAGATGAGCAAGCTTAA | 1698 | 0.5124 | MVRAFEVGAVPFNPDGWGPLDSTAGGATTNNLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRPKNPADSAFDFTNDDSFPASADDDSSFRLVDGKPPPRPKFGPKWRFQQQRQLPQRRDEEVEARKREAEKERARRDRLYHLNRSNPNAPRREAAVFKSSVDIQPEWNMHDQIPFATFSKLSFNVPEPEDLLLCGALEYYDRSYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTTNMWGIVKSIVDLCMKLNEGKYVLVKDPAKPQVRIYEVPADAFENDYVEEPLPEEEQVQPPAEGADGGEAAATTNDVEDKQIDEQA. | 566 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g05080 | 565 | Pfam | Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) | 6 | 516 | IPR007783 | GO:0003743|GO:0005737|GO:0005852 | |
Seca5g05080 | 565 | Coils | Coil | 117 | 137 | - | - | |
Seca5g05080 | 565 | MobiDBLite | consensus disorder prediction | 112 | 135 | - | - | |
Seca5g05080 | 565 | MobiDBLite | consensus disorder prediction | 57 | 135 | - | - | |
Seca5g05080 | 565 | MobiDBLite | consensus disorder prediction | 525 | 565 | - | - | |
Seca5g05080 | 565 | PIRSF | Transl_init_eIF3d | 1 | 546 | IPR007783 | GO:0003743|GO:0005737|GO:0005852 | |
Seca5g05080 | 565 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 | 4 | 539 | IPR007783 | GO:0003743|GO:0005737|GO:0005852 | |
Seca5g05080 | 565 | Hamap | Eukaryotic translation initiation factor 3 subunit D [EIF3D]. | 3 | 528 | IPR007783 | GO:0003743|GO:0005737|GO:0005852 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g05080 | Seca-Chr5 | 108007604 | 108009477 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g05080 | 1 | 563 | Eukaryotic Initiation Factors Gene Family | AT4G20980 | 77.041 | 0.0 | 912 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g05080 | K03251 | - | gmx:100799613 | 1013.45 |