Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05061 ATGCTCTGCGTCAAGCTGTCAAGCATGTGTGGCGAAACTAGAAACAGGGAAAAAATGGACGAACTTAATGCTAGGGTTCCCTCAGAGAATGAAATCTGTAGCATCGAGTTTCAGATTGCTTCAACTACGATTCAACAGGGACGTGGCAGCGATGCTCGGGGTGGAATGGGAATGGGAATGAGAATGCACAAGACCTATGTGCAACAGTTAGAATCAAGTCATTTGAAGTTGATGCAGTTGGAGCAGGAGCTTGAACGTGCAAGACAACAGGGAATGTATATAGGTGGTGGGTTGGATTCAAATAATCTCTGTTTTGCTGGACATGTAAATTCAGGTTGCTTACTCTGCGAACTTGCTCCTTCCTTTGCTTCCCCAGAAGCTTCTTCTTCAGCCTCGTGTTCCAGTAGTTCTTTATGTCATTATCTGTGCGCCCTGGTAACTGTGCTGCTATAA 453 0.4525 MLCVKLSSMCGETRNREKMDELNARVPSENEICSIEFQIASTTIQQGRGSDARGGMGMGMRMHKTYVQQLESSHLKLMQLEQELERARQQGMYIGGGLDSNNLCFAGHVNSGCLLCELAPSFASPEASSSASCSSSSLCHYLCALVTVLL. 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05061 150 Coils Coil 67 90 - -
Seca5g05061 150 PANTHER TRANSCRIPTION FACTOR TGA9 63 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05061 Seca-Chr5 107781718 107786206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05061 64 118 Calmodulin-binding Proteins AT5G65210 60.000 8.67e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05061 K14431 - gmx:548066 79.7221