Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g05041 | ATGAACCATGGTGAGCATATTGGTTATATTTTGGTCATGGTCACTCTATCCATATCTCTGGTAGTTCTTGGTGTTATCCTGTTTTTCGCTTGTAAGAAGAAACCTGTTGAATCTGAAGAAACACTTCCTGTGAAGCTCTGTGCTCGTGCATACCCTTTGATGGAAATTGATGCTGCAACCGATGGTTTCAATCATAGGAGAATTGTGGGTCAGGGTCGCTTAGGAACTGTGTATGCAGGGACTCTGGAGAAAGAAGAGCTTGTAGCTGTAAAGCGCATTCATCCCTTTCTTGTGTTGAGCAATGCTGGATTTGGTTTCTCATCAGTGTTAAAATGGCTCTCTTTAGCTCAACACCCCAACGTGGTTCCAATAATAGGATTCTCAGAAGCACCAGGTGAGAGAGTTATAGTGATGGAGTTTATTCGCATGTCAAGTTTAGATTTTTACTTGCATCAGAACCAAGATGGGGCTTCCCTTTTGGATTGGAACAAGAGGTTCAGGATTGCAGCTGGAGCAGCTAGGGGGCTTCAATACCTGCATGAAGTGGTAGCACCAAACATTGTACATGGGTGTGTTAAGTCCTCTAATGTTCTTATTGATATCAACTTTTGTGCTAGGATTACTGATTATGGCCTTAACTTTTTGGCATCCTTAGAAAAGAGAGGGCTAGTAGGGTATGTGGATGATGAATATTGGAATGAAGGAAGGGGTAGCAGCGCTTCCAAGGAAAGTGACATTTATGGGTTAGGGGTGGTCCTATTGGAGCTTTTAAGTGGGAGAAGATGTGAGGAAGGGTTGCTGGTAAAGTGGGCATTGCCTTTGATCAAGGAAGTGAGGTTTAGTGAACTTTTGGATCCTAGGTTGGTGATTCCTTCTGATATTAAGCCTCTGGTTAGATTAGCCAAAGTTGCTTCAGCTTGTGTTGGTAATTCAAGGAAATGTAGACCTTGCGTGTCTCAAGTGGCAACCATTTTGAATAATATAGAGACGGAAGTGTGCCTCTGA | 1005 | 0.4289 | MNHGEHIGYILVMVTLSISLVVLGVILFFACKKKPVESEETLPVKLCARAYPLMEIDAATDGFNHRRIVGQGRLGTVYAGTLEKEELVAVKRIHPFLVLSNAGFGFSSVLKWLSLAQHPNVVPIIGFSEAPGERVIVMEFIRMSSLDFYLHQNQDGASLLDWNKRFRIAAGAARGLQYLHEVVAPNIVHGCVKSSNVLIDINFCARITDYGLNFLASLEKRGLVGYVDDEYWNEGRGSSASKESDIYGLGVVLLELLSGRRCEEGLLVKWALPLIKEVRFSELLDPRLVIPSDIKPLVRLAKVASACVGNSRKCRPCVSQVATILNNIETEVCL. | 335 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g05041 | 334 | Pfam | Protein tyrosine and serine/threonine kinase | 66 | 323 | IPR001245 | GO:0004672|GO:0006468 | |
Seca5g05041 | 334 | Gene3D | Phosphorylase Kinase; domain 1 | 29 | 140 | - | - | |
Seca5g05041 | 334 | PANTHER | OS01G0253100 PROTEIN | 46 | 329 | - | - | |
Seca5g05041 | 334 | FunFam | serine/threonine-protein kinase-like protein ACR4 | 30 | 140 | - | - | |
Seca5g05041 | 334 | ProSiteProfiles | Protein kinase domain profile. | 63 | 328 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g05041 | 334 | FunFam | Receptor protein kinase CRINKLY4 | 142 | 332 | - | - | |
Seca5g05041 | 334 | SUPERFAMILY | Protein kinase-like (PK-like) | 40 | 325 | IPR011009 | - | |
Seca5g05041 | 334 | PIRSF | ILK | 31 | 333 | - | - | |
Seca5g05041 | 334 | Gene3D | Transferase(Phosphotransferase) domain 1 | 142 | 332 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g05041 | Seca-Chr5 | 107627057 | 107628061 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g05041 | 48 | 325 | Receptor kinase-like Gene Family | AT3G59420 | 39.726 | 9.18e-55 | 190 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xb-1 | Seca5g05041 | PK_Tyr_Ser-Thr | 9.4e-25 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g05041 | - | - | vun:114187437 | 587.415 |