Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05032 ATGGATAGGATATCATTAAAATTTAAAAGGCAACAAGTTCCACTGATTCTAATATTTGATTTTAGTGTTGATTTTACTTTTGTTTGTCACAAAAAAGTAGGTGCAGGGCAATTGATCAGTGTGCAAAAAATGGAGATCAACCAAAGGCATGGAGCTGAAGAACTGTTTCAAGCTCAGACCCATTTATATAAATATACTTACAGTTTCATTGCTTCCATGTGCCTGAAAAGTGCAGTTCATTTGGGAATACCAGACATAATCTATAACCATGGCCAACCCATTACTATCCCTGAGTTGGTCTTGGCACTTCAGATAGACCCTGCTAAGTCTGGTTATGTATATAGGCTCATGCGTTTGCTGGTGCATGCTGGCTTCTTTGCTACAACCAAAACCAAGGTTGTAAAAGATGACGAGAAGGAAGAAGTAGGGTATGATCTCACACCTTCTACAAGGCTTCTCCTCAAAGACAACGTCCCAACCTTGTCTCCTTTTGTTAGGACAATGTTTCACCCGGCTATAGTTCACTCATCTGAATTTTTGGGAGAATGGTTTCACAGAAATGATCTCACACCCTTTCAAACTGCATTTGGCATGGGCTTTTGGGACTATTTAGGCCAAAACCAAGAGTTTAACATGCTCTTCAATGAAGCAATGATTAGTGATTCTGGGATGATGAATTTGGTAATCAAAGATTGCAAATCTGTTTTTGAGGGATTGAATTCATTGGTTGATGTTGGGGGTGGTAAGGGACCTGTAGCTAGGATAGTTTCTGAGTCACTGCCTAGTCTGTAA 792 0.3977 MDRISLKFKRQQVPLILIFDFSVDFTFVCHKKVGAGQLISVQKMEINQRHGAEELFQAQTHLYKYTYSFIASMCLKSAVHLGIPDIIYNHGQPITIPELVLALQIDPAKSGYVYRLMRLLVHAGFFATTKTKVVKDDEKEEVGYDLTPSTRLLLKDNVPTLSPFVRTMFHPAIVHSSEFLGEWFHRNDLTPFQTAFGMGFWDYLGQNQEFNMLFNEAMISDSGMMNLVIKDCKSVFEGLNSLVDVGGGKGPVARIVSESLPSL. 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05032 263 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 63 263 IPR016461 GO:0008168
Seca5g05032 263 FunFam Coniferyl alcohol 9-O-methyltransferase 45 153 - -
Seca5g05032 263 Gene3D Vaccinia Virus protein VP39 154 263 IPR029063 -
Seca5g05032 263 PANTHER O-METHYLTRANSFERASE 54 262 IPR016461 GO:0008168
Seca5g05032 263 Gene3D - 44 153 IPR036388 -
Seca5g05032 263 Pfam Dimerisation domain 73 121 IPR012967 GO:0046983
Seca5g05032 263 Pfam O-methyltransferase domain 185 262 IPR001077 GO:0008171
Seca5g05032 263 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 160 261 IPR029063 -
Seca5g05032 263 SUPERFAMILY "Winged helix" DNA-binding domain 53 157 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05032 Seca-Chr5 107537617 107539436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05032 73 263 Monolignol Biosynthesis Gene Families AT5G54160 29.442 5.47e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05032 K22588 - cave:132173004 272.707