Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05029 ATGAAGAAGATTTCCAAGAGCAGCTGCAAGTCAGCATCACACAGGCTCTTTAAGGACAAGGCAAAGAACCATGTTGATGATCTTCAGGTGATGTTCCTGGATCTCCAGTTTGCCAGGAAGGAGAGCCGTACTGTTGATGCTGCACTTCTTGAGGAGCAAGTCCATCAGATGCTTCGGGAGTGGAAGGCTGAGCTCAATGAGCCTTCTCCTGCTTCTTCTTTGCAGCAAGGAGGCAGTCTTGGATCATTTTCAACCGATATCTGTAGGCTATTGCAGCTTTGTGAGGAGGAAGATGATGCCACTAGTCCATTAGCTGTGCCTAAGCCTGAACCTAATGATCAGACTATGCAGGCTGGGGCTAAGGTGATATTCCAAGAGGGTTTAAATGTAAATCAGGGCCAGCATCAACATGATTTCCTATTAATTGATGAGTGCAAACACTCAACCTTAGGAGTTCCCAATCTGGCAGCTAACAACTTGGATGGGCGGCCTGCTTTAGAATTAGAGTATCATCAATTTGATTCAAATGAGGACTTCAATCACAGCTTCTATGCTGGTTTTAATGGTACAGATTTTTGTGAGGAGGATGCTGTTCCTCATATATCTGGCTATCTACCAAGTCTCTGCCCTCCTCCTTCTGCTTTCTTAGGCCCAAAATGTTCACTTTGGGACTGTTCAAGGCCTGTGCAAGGGTTGGACTGGTGTCAAGACTATTGCAGTAGCTTTCATGCTGCTCTAGCTTTAAATGAAGGACCACCAGGCATGGCCCCAGTTCTACGGCCTGGGGGAATTGGACTGAAGGATAATTTACTTTTTGCTGCGCTTAATGCAAAGGCAGAAGGAAAAGAAGTTGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAGTCTCCATGGAATGCACCTGAGCTCTTTGATCTTTCTGTTCTTGAGAGTGAGACTATTAGGGAGTGGCTTTTCTTTGATAAGCCTCGAAGAGCATTTGAGAGTGGAAACAGAAAGCAGAGATCATTGCCAGATTATAGTGGGCGTGGATGGCATGAATCTAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAGAGATCCTATTATATGGACCCACAGCCACTAAACCATTTTGAGTGGCACCTTTATGAGTATGAAATTAGCAAGTGTGACGCATGTGCCTTATATCGGTTGGAACTAAAGCTTGTTGATGGGAAGAAGAGCTCCAAGGGAAAGATAACTAGTGATTCAGTTGCTGATCTGCAGAAGCGAATGGGAAGGCTCTCTGCTGAGTTTCCCTATGATAACAAACGGTCTGCCAAAGGCAGGGCCAAACTTAATGCCAAGGTTGCCAGCATAGATGGTGTCTATTCAGCTTCAAATAGAGTGACTCCACTAAATGGAACATATGAATATGGGTTAGCTGCACCATATGATTATCTTGTTGAAAACCCAAGCAACTATTATGTGACATGA 1464 0.4488 MKKISKSSCKSASHRLFKDKAKNHVDDLQVMFLDLQFARKESRTVDAALLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDATSPLAVPKPEPNDQTMQAGAKVIFQEGLNVNQGQHQHDFLLIDECKHSTLGVPNLAANNLDGRPALELEYHQFDSNEDFNHSFYAGFNGTDFCEEDAVPHISGYLPSLCPPPSAFLGPKCSLWDCSRPVQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFAALNAKAEGKEVGIPECEGAATAKSPWNAPELFDLSVLESETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKSSKGKITSDSVADLQKRMGRLSAEFPYDNKRSAKGRAKLNAKVASIDGVYSASNRVTPLNGTYEYGLAAPYDYLVENPSNYYVT. 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05029 487 PANTHER TRANSCRIPTION FACTOR VOZ1 1 480 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05029 Seca-Chr5 107510726 107514080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05029 3 486 VOZ-9 Transcription Factor Family AT1G28520 69.495 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Seca5g05029 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05029 - - gmx:100806521 848.195