Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05022 ATGGGCTACTTGGATCCTGAATATTACATGACCCAACAGTTGACTGAAAAGAGTGATGTGTACAGCTTTGGAGTGTTAATGCTGGAACTAGTGACAGCAAGAAGGCCAATAGAACAAGGAAAGTATATTGTAAGAGAGGTAATGAGGGTAATGGATACATCAAAAGATTTATACAACCTTCATTCCATTATAGATCCAACTATGATGAAAGTGACAAGCCCAAAAGGTTTAGAAAGGTTTGTGGGACTGGCAATGAGGTGTGTCAAAGAATATGCAGCTGAGAGGCCTACAATGGCTGAGGTTGTGAAAGAGATTGAAAACATAATTGAGCTTGTTGGAGTGAACCCCAATGCTGAATCAGCTTCAACATCAGAAACTTATGAGGAAGCAACCGGAGGGAATGTCCAACATCCTTATGTCAATAGACTCAATAATGATTTTGAATATAGTGCAATGTTTCCATCAACAAAGGTAGAACCTCAATGA 486 0.393 MGYLDPEYYMTQQLTEKSDVYSFGVLMLELVTARRPIEQGKYIVREVMRVMDTSKDLYNLHSIIDPTMMKVTSPKGLERFVGLAMRCVKEYAAERPTMAEVVKEIENIIELVGVNPNAESASTSETYEEATGGNVQHPYVNRLNNDFEYSAMFPSTKVEPQ. 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05022 161 Gene3D Transferase(Phosphotransferase) domain 1 1 129 - -
Seca5g05022 161 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca5g05022 161 SUPERFAMILY Protein kinase-like (PK-like) 2 112 IPR011009 -
Seca5g05022 161 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 123 - -
Seca5g05022 161 Pfam Protein tyrosine and serine/threonine kinase 3 104 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05022 Seca-Chr5 107478608 107479648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05022 1 161 Receptor kinase-like Gene Family AT5G49760 56.173 6.66e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Seca5g05022 PK_Tyr_Ser-Thr 3.5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05022 - - gmx:100796868 266.929