Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05016 ATGGGGACCTCTGATACACATTTGTTGCTTTCTCTGACTCTGATGATTTTCATTGTTTGCTTGTTGTGTGTGATGGCCAAAGTTGAAGCTTTAAACAAAAAGAATATCTCTGGCTTTTATGTGTTTGGAGACTCCACGGTAGATGCAGGGAACAACAACTATATAAAGACGCTTTTCAGGAGCAATTTTCCACCATATGGCATTGATTTTTCCAACCATGTTCCTACAGGGAGGTTTACCAATGGGAAGCTTGCCACTGATTACATTGTTTCATATATAGGTTTGAAGAAAGACCTTCTTCCACCTTATTTGGACCCAAACATGAGAAATAATATTGAAGAGTTGCTGACAGGAGTTAGTTTTGCCTCTGCTGGTTCTGGGTTTGACCCTCTTACACCAAGCATCTCTAATGTGATTCCAATACCAAAGCAATTGGAATATTTTAGAGAATGTAAAAAGAGGCTGGAAAATGCGCTGGATAAGCAAAGAATAGAAAATCATATGAAGAAGGCAGTGTTTTTCATGAGTGCTGGTACCAATGACTTTGTTCTTAATTATTTTACTTTACCAATGCGAAGAAAGAGCTTCACTCCCTTAGCCTACCAGCACTTCTTGATTCAGCAAATCAAACAATTTATACAGGAATTGTTGGCAGAAGGCGCTGAAAAAATTGCAATAGTTGGAGTACCTCCTATTGGATGCCTACCGTTGATGATCACCTTGAATTCTCCTAATGCGTTTTTGCAGCGTGATTGTATTGACCAATATTCCTCCGTTGCTCGAGATTTCAATCAACTCCTTCAAACTGAATTATACACAATGCAATTGCAGCTCAATAATGTATCTTATCCAAATGCTAAGATCTATTACGTTGACATATATGGACCATTGGCCAATATGATTCAATCGCATCAAAGATTTGGATTTGATGAGGTACACAATGGCTGTTGTGGAAGTGGGTACATTGAAGCAACAATTTTGTGTAATGAGATTTCAGATGTCTGCCCTGACCCATCCAAATATATATTCTGGGATTCAATTCACCCAACAGAGAAGGTATACCACAACCTCTTCTTGGCTAGCTTGTCCACCATTGATTTTATCATCAACAACTAG 1116 0.3862 MGTSDTHLLLSLTLMIFIVCLLCVMAKVEALNKKNISGFYVFGDSTVDAGNNNYIKTLFRSNFPPYGIDFSNHVPTGRFTNGKLATDYIVSYIGLKKDLLPPYLDPNMRNNIEELLTGVSFASAGSGFDPLTPSISNVIPIPKQLEYFRECKKRLENALDKQRIENHMKKAVFFMSAGTNDFVLNYFTLPMRRKSFTPLAYQHFLIQQIKQFIQELLAEGAEKIAIVGVPPIGCLPLMITLNSPNAFLQRDCIDQYSSVARDFNQLLQTELYTMQLQLNNVSYPNAKIYYVDIYGPLANMIQSHQRFGFDEVHNGCCGSGYIEATILCNEISDVCPDPSKYIFWDSIHPTEKVYHNLFLASLSTIDFIINN. 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05016 371 SUPERFAMILY SGNH hydrolase 165 357 - -
Seca5g05016 371 PANTHER GDSL ESTERASE/LIPASE EXL3 19 357 - -
Seca5g05016 371 CDD SGNH_plant_lipase_like 39 363 IPR035669 -
Seca5g05016 371 Gene3D SGNH hydrolase 26 366 IPR036514 -
Seca5g05016 371 Pfam GDSL-like Lipase/Acylhydrolase 40 358 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05016 Seca-Chr5 107411151 107416794 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05016 41 357 Pollen Coat Proteome AT1G75910 34.969 1.07e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05016 - - gmx:100788326 586.26