Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05015 ATGATGTTAACCATGAAAGTGATACTACTGGCAGTGGCACTGACCATAATGTCATGGTATTCAGTAGTTGCCGTGGACAACATTCATCTAATGAGGCAATTGGCTGCTAAGAATAATGTGAGTTGCATCCTGGTATTTGGAGATTCAAGTGTTGATCCTGGCAACAACAATGTTCTTCGAACCACCGTGAAAGGCAACTTTCCTCCTTACGGGAAGGACTTCTTTAACAGCCTCCCAACAGGAAGGTTTACTAATGGCAGACTTGCTACAGACTTCATTGCTGAAGCATTAGGATACAGAAAAGTAATTCCGGCATTTCTTGACCCAAAATTGAAGGCAGAAGATCTGCCATATGGTGTTAGTTTTGCATCAGCAGCTACAGGTTATGATGATTATACTGCTAATATTTCGGTACATACATTCTATGACCCTGCTTTTGAATTCAATAGTGTTCTGTCTGTTTCGAAACAGCTCGAGTATTTTAAGCATTATAAGATCCACTTGAGAAAATTGGTGGGTGAAGAAAAGGCAGAATTCATTATAAGAAATGCATTGTATATTGTTAGCATGGGTTCAAATGACTTCCTCCGAAACTATTTCTTGGAACCAACTCGCCCCAAGCAATTCAGCTTGCCAAAATTTCAGGATTTCTTGCTCTCCCTCATGACTAAGGACATTCAGGTGATGTATAGGCTAGGAGCAAGGAGGTTGGTGGTTGTAGGACTCCTTCCCATGGGATGTATTCCATTTATGATGACCATTAAGAACCAACAAAGCTGCGTTAGAAGTCTAAACAGTGTAGCTTATTCATTCAATGTAAAATTATTACAGCAATTGGCCCACTTGAAGGCAAAACTGGGCTTACACATTGTTTATGTTGATATTTATGGTATGATTCAAAGTGCCATAATGGACCCTAAAAAATACGGTTTTCATGAAGTCTCAAAGGGATGTTGTGGGACAGGGACAATAGAATATGGAGATTCATGCAAAGGGAAGAGTACTTGTTCAGATCCCAACAAATATTTATTCTGGGATGCTGTTCATCCAACACAGAAGATGTATAAAATTGTCGCTGATAAGGCCATCCAATCTATTACTAAAGAACTCTTTTCACACCATAGTTGCCATTTAAATGCATGA 1143 0.3937 MMLTMKVILLAVALTIMSWYSVVAVDNIHLMRQLAAKNNVSCILVFGDSSVDPGNNNVLRTTVKGNFPPYGKDFFNSLPTGRFTNGRLATDFIAEALGYRKVIPAFLDPKLKAEDLPYGVSFASAATGYDDYTANISVHTFYDPAFEFNSVLSVSKQLEYFKHYKIHLRKLVGEEKAEFIIRNALYIVSMGSNDFLRNYFLEPTRPKQFSLPKFQDFLLSLMTKDIQVMYRLGARRLVVVGLLPMGCIPFMMTIKNQQSCVRSLNSVAYSFNVKLLQQLAHLKAKLGLHIVYVDIYGMIQSAIMDPKKYGFHEVSKGCCGTGTIEYGDSCKGKSTCSDPNKYLFWDAVHPTQKMYKIVADKAIQSITKELFSHHSCHLNA. 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05015 380 Pfam GDSL-like Lipase/Acylhydrolase 43 361 IPR001087 GO:0016788
Seca5g05015 380 Gene3D SGNH hydrolase 27 370 IPR036514 -
Seca5g05015 380 CDD SGNH_plant_lipase_like 42 366 IPR035669 -
Seca5g05015 380 PANTHER GDSL ESTERASE/LIPASE EXL3 17 361 - -
Seca5g05015 380 FunFam GDSL esterase/lipase APG 32 367 - -
Seca5g05015 380 SUPERFAMILY SGNH hydrolase 185 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05015 Seca-Chr5 107406219 107410456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05015 22 370 Pollen Coat Proteome AT1G75930 34.262 3.68e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05015 - - gmx:100819691 500.36