Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05013 ATGTCTGTGCCTACTTCTGCAGCTTCTTCTTCTTCCTTTCTTTTCACTTCTTTGTTTGTTTTCTTCACTTTGACTGAGACTTCATTTTGTTTAGCCAAAACTACCCGCCCCCATAGACAGCTCTCAGTTGATTATTATGCCAAGTCTTGCCCCCAGCTAGAGAAGTTCGTTGCCTCAGTCACATTTCAACAATTCAAAGAAGCACCTGTTTCTGGCCCTGCCACCATTCGCCTCCTCTTCAATGATTGCTTTGTAGGAGGTTGTGATGCATCAATTTTAATAGCATCAAAGCCTGGAAGCAAGGAGTTGGCAGAAAAGGATGCAGAGGTCAACAAAGATTTGAGGATAGAGGGCTTTGAGACTATAAGGAAGGCTAAGGCATTGGTGGAGAGCAAGTGCCCAGGAGTAGTGTCCTGTGCTGACATTCTTGTAATTGCAGCCAGAGATTTTGTACACCTGGCAGGAGGGCCCTATTACCAAGTGAAGAAGGGAAGATGGGATGGAAAGATATCAACGGCATCAAGGGTGGGACACAACATTCCTCGTGCAAACTCCACCGTTGATCATATGATTAAGCTCTTCAATTCCAAAGGCTTAACCATAAAAGACATGGTTGCCCTCATGGGTGCCCACACATTCGGGTATGCTCATTGCAGGAACTTTGTGTCCAGTCTATACAATTATCGGGGCACAAGACAACCTGATCCGAATATGAACCCAAAACTCATACATGCACTGAGAATGTATTGTCCAAGATATGGTGGAAATTCAGATGTTGTGGTACCATTTGATGTCACCACTCCATTCTCATTTGACAATGCCTATTACGGGAACTTGGAGAAAAAGTTTGGGTTGCTAGCTTCTGACCAGGCCCTGTTTTTGGACTCACGAACCAAGCCTATAGTTCAAGCTCTAGCAAAGAATAAACATCAATTTTTTCAAGCTTTTGCAGCTGCAATGAACAAAATGAGTTTGATAAAAGTGTTAAGAGGGAGAAAGCATGGGGAGAAAAGAAGTGATTGTAGCATGCATATGTGA 1038 0.4345 MSVPTSAASSSSFLFTSLFVFFTLTETSFCLAKTTRPHRQLSVDYYAKSCPQLEKFVASVTFQQFKEAPVSGPATIRLLFNDCFVGGCDASILIASKPGSKELAEKDAEVNKDLRIEGFETIRKAKALVESKCPGVVSCADILVIAARDFVHLAGGPYYQVKKGRWDGKISTASRVGHNIPRANSTVDHMIKLFNSKGLTIKDMVALMGAHTFGYAHCRNFVSSLYNYRGTRQPDPNMNPKLIHALRMYCPRYGGNSDVVVPFDVTTPFSFDNAYYGNLEKKFGLLASDQALFLDSRTKPIVQALAKNKHQFFQAFAAAMNKMSLIKVLRGRKHGEKRSDCSMHM. 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05013 345 Gene3D - 44 343 - -
Seca5g05013 345 PRINTS Plant peroxidase signature 74 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g05013 345 PRINTS Plant peroxidase signature 262 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g05013 345 PRINTS Plant peroxidase signature 136 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g05013 345 PRINTS Plant peroxidase signature 202 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g05013 345 PRINTS Plant peroxidase signature 50 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g05013 345 PRINTS Plant peroxidase signature 155 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g05013 345 PRINTS Plant peroxidase signature 117 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g05013 345 PRINTS Plant peroxidase signature 278 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g05013 345 PRINTS Plant peroxidase signature 318 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g05013 345 PRINTS Haem peroxidase superfamily signature 72 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g05013 345 PRINTS Haem peroxidase superfamily signature 137 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g05013 345 PRINTS Haem peroxidase superfamily signature 203 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g05013 345 PRINTS Haem peroxidase superfamily signature 155 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g05013 345 PRINTS Haem peroxidase superfamily signature 264 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g05013 345 Gene3D Peroxidase, domain 2 181 323 - -
Seca5g05013 345 SUPERFAMILY Heme-dependent peroxidases 40 343 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g05013 345 Pfam Peroxidase 61 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g05013 345 ProSiteProfiles Plant heme peroxidase family profile. 40 345 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g05013 345 FunFam Peroxidase 181 323 - -
Seca5g05013 345 CDD secretory_peroxidase 40 342 IPR033905 GO:0004601|GO:0042744
Seca5g05013 345 FunFam Peroxidase 44 192 - -
Seca5g05013 345 ProSitePatterns Peroxidases proximal heme-ligand signature. 203 213 IPR019793 -
Seca5g05013 345 PANTHER - 30 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05013 Seca-Chr5 107397334 107400062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05013 12 345 Peroxidase AT2G34060 60.234 2.68e-154 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05013 K00430 - gmx:100777463 525.398