Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05007 ATGGGTTCAGGCGATTGGTTTAAGTCAATAATTAGCTTAAGAAAATCAAAATCAGGCAGATCAAAGAAAGCAAAGGGTATCTTAGCTCAGGAGAATCTAAGTGCATTGAAGTCAAACAATTATACAGGAAAAGAGTCTAGTGGTTTAGCAAATGGTATTAAAAATGAAAATCTTGGGTCAGCTGGGGTGTCAGATGAAGTTATTGCAGCGACAAAGATCCAGACTGCATTCCGGGCTTATAAGGCTAGAAAAGCTCTACGTCGCTTGAAAGGGTTCACAAAACTGAAGGTCCTAACAGAAGGTTACTCTGTTAAAAAGCAAGCCAGTACAGCTATAACATACCTTCATTCATGGAGCAAGATACAGGCAGAGATTAGAACTCGCCGAATCTTTATGGTGACAGAAGACAGGATCAGGCGGAAGAAACTAGAGTCTCAACTAAAACTTGAGGCAAAGCTCCATGATCTGGAGGTTGAATGGTCTGGTGGTTCTGAAACCATGGAGGAAACCCTTGGAAGGATACATCAGAGAGAAGAAGCAGCAGTTAAGCGGGAAAGAGCCATGGCATATGCCTTTTCTCATCAGTGGAGGGCCAACTCTAGTCAGAGCCAAATGCTTGGTAATTATGAACTTGGCAAAGCTAACTGGGGTTGGAGCTGGAAGGAACGCTGGATTGCTGCTCGCCCATGGGAAAGCCGTGTCCATGGCATTAGCCCAAAGAAAGCTCAAAATAAGCAGCCAAGCAAGTCTCAGAAGGATAAGAGTGCATCAACAACACCTAAAACCCCTGCTTCAGCCAATGCACAAGGGACTCCTCCTTTGGGTAATGGAAAAGGGACTACAAAAGCTAGGAGATTGTCTTATCCACCCACAGAAAAAACCGTGGTTCAAGAAGGAGTGCAGTGA 906 0.4426 MGSGDWFKSIISLRKSKSGRSKKAKGILAQENLSALKSNNYTGKESSGLANGIKNENLGSAGVSDEVIAATKIQTAFRAYKARKALRRLKGFTKLKVLTEGYSVKKQASTAITYLHSWSKIQAEIRTRRIFMVTEDRIRRKKLESQLKLEAKLHDLEVEWSGGSETMEETLGRIHQREEAAVKRERAMAYAFSHQWRANSSQSQMLGNYELGKANWGWSWKERWIAARPWESRVHGISPKKAQNKQPSKSQKDKSASTTPKTPASANAQGTPPLGNGKGTTKARRLSYPPTEKTVVQEGVQ. 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05007 301 PANTHER IQ-DOMAIN 5-RELATED 1 264 - -
Seca5g05007 301 MobiDBLite consensus disorder prediction 235 301 - -
Seca5g05007 301 ProSiteProfiles IQ motif profile. 69 94 IPR000048 GO:0005515
Seca5g05007 301 Gene3D - 22 96 - -
Seca5g05007 301 MobiDBLite consensus disorder prediction 239 276 - -
Seca5g05007 301 Pfam IQ calmodulin-binding motif 69 87 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05007 Seca-Chr5 107338181 107342613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05007 1 289 IQD Protein Family AT2G33990 52.249 7.12e-90 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05007 - - vun:114186748 468.003