Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04951 ATGGGGTGGCCAACACGACACCGTATCGCGGTTGGGGTAGCGCGTGGGCTAGCTTTCCTCCACCACGCGGGTTCGAAGCCCGTCGTTCACGGCCACCTGGTGACACCAAACGTCCTTCTCGCCGATGATTTCGAGCCTCGAATCGCTGATTTCGGGTTCCGGAAGTTCGGGCAGCAACAAGGCCCCCTGAATTGCAGCACCGAAACGGACGTGTATTGCTTCGGGGTGGTGCTGATGGAGCTTCTGACGGGGAAGCCCGGCACGGCGGAGACGGTGGTTTGGGTGAGGAAGCTGGTTAGGGAGGGCCACGGGGTGCGGGCACTCGACGAGAGGCTCAGACTCGGTGGCGCTGACTCGGAGAGTGAGATGGTGGAGAGCCTCCGAGTCGCGTATCTCTGTACGGCCGAGTCACCGGGGAAGAGGCCCACCATGCAACAAGTGTTGGGCCTTCTCAAAGACATTCATCCTAGCCGCGGGCTTGACTGA 486 0.6173 MGWPTRHRIAVGVARGLAFLHHAGSKPVVHGHLVTPNVLLADDFEPRIADFGFRKFGQQQGPLNCSTETDVYCFGVVLMELLTGKPGTAETVVWVRKLVREGHGVRALDERLRLGGADSESEMVESLRVAYLCTAESPGKRPTMQQVLGLLKDIHPSRGLD. 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04951 161 SUPERFAMILY Protein kinase-like (PK-like) 2 151 IPR011009 -
Seca5g04951 161 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 154 - -
Seca5g04951 161 Gene3D Transferase(Phosphotransferase) domain 1 62 158 - -
Seca5g04951 161 Pfam Protein tyrosine and serine/threonine kinase 6 56 IPR001245 GO:0004672|GO:0006468
Seca5g04951 161 ProSiteProfiles Protein kinase domain profile. 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca5g04951 161 Gene3D Transferase(Phosphotransferase) domain 1 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04951 Seca-Chr5 106792262 106792747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04951 3 161 Receptor kinase-like Gene Family AT5G49660 39.362 3.70e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Seca5g04951 PK_Tyr_Ser-Thr 4.6e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04951 - - gmx:100778920 287.73