Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04936 ATGAAGAACTGTGATGAATGGAAACCTTTTATAGTAATGATAGCAATTGATTTTTCTTTTGCAGCAGTGAATATTCTCCTCAAGAAAGTCCTTGAGGAAGGAATGAACCATTTGGTTTTTATCACATACCGTCTCTCAATTGCTACCATTTTCGTAGCACCAATCGGTTACTTTTGGGAAAGAAATGGCAGACCTCGGCTAACATTTCGAATTTTATGTTACCTCTTCTTCAGTGCCATTGTTGGGGCATCAGTCACTCAATACTTTTTCCTTCTAGGGATCCAATATACATCTGCTACATTTGCTTGTGCTTTTGTCAACATGGTGCCTGTGGTCACCTTCATCATGGCTTTGCCATTTGGGTTAGAGACTGTGAACATCAAGTGCAACAGTGGGAGAGCGAAGATTCTTGGTACATTGGTGTGCGTAGGCGGCGCATTGTTGTTGACACTTTACAAAGGAAAAGGACTGTTTCATTTTTCTCATTCTTCTGTAGCAACAAGTCCTGCAGTGAAGTTAGCTGCTGCTTCTACAAGGACAACAGAGAAATGGACTATTGGTGTAATAGCTTTGATTTTGGGGACCCTGTTTTGGTCTTCTTGGTTCATTTTACAATCAAATATAAGCAAGAGATATCCATGCCAGTATTCTAGCACAGCCATCATGAGTTTCTTTGGAGCCATTCAATCAGCTGTCATTTGCTTTCTCACTGACCACAACTTGTCCATTTGGGTTCTCAAGGGAAAGATACAAATAATTGCCATTCTGTATGCTGGAATGATTGGATCGGGTTTGTGTTTTGTGGGCATGTCATGGTGTGTCAAGAAGAGGGGTCCAGTATTTACTGCAGCATTCAGCCCTCTTGTTCAGATAATGGCAGCTATGGTTGATATCCCTGTCTTGCATGAACAGCTCTATCTTGGAAGGTCACTACCATTACTAACTACCAATTTTTTTTTGTTTTTCTTTTGCTGA 975 0.4072 MKNCDEWKPFIVMIAIDFSFAAVNILLKKVLEEGMNHLVFITYRLSIATIFVAPIGYFWERNGRPRLTFRILCYLFFSAIVGASVTQYFFLLGIQYTSATFACAFVNMVPVVTFIMALPFGLETVNIKCNSGRAKILGTLVCVGGALLLTLYKGKGLFHFSHSSVATSPAVKLAAASTRTTEKWTIGVIALILGTLFWSSWFILQSNISKRYPCQYSSTAIMSFFGAIQSAVICFLTDHNLSIWVLKGKIQIIAILYAGMIGSGLCFVGMSWCVKKRGPVFTAAFSPLVQIMAAMVDIPVLHEQLYLGRSLPLLTTNFFLFFFC. 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04936 324 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 154 - -
Seca5g04936 324 PANTHER WAT1-RELATED PROTEIN 8 307 IPR030184 GO:0016020|GO:0022857
Seca5g04936 324 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020
Seca5g04936 324 Pfam EamA-like transporter family 186 307 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04936 Seca-Chr5 106677016 106679714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04936 7 258 Nodulin-like Gene Family AT3G30340 50.000 1.60e-91 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04936 - - gmx:100803670 545.814