Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04921 ATGATGAAGTGGGGAGGAAGAAAACCTTCTTCTTCTTCTTCTAGACCTTCTCATGCATCTCCTTTTTCTTGGCTGTCCAAGTTCAAGCAGATGAGAATCAATTCAGAGCCAAATCCTGCAAAAATGAAGCACAAGGAAAAGCATATTTCACCAAAGTATTCATGTGGAAATGGAGATGATGGTGCTTTCTGGAGACAATCATTTGTTGAAGGGATTCAAGAGGATATGAAATTGAAAAGTAAAGACATTGATGAGCATGTCATTCCATCCTCAAGTTGCCATGGTGGTGGAAGAAATGCTAAGAAAGATAGACAAAGAGAAAGTACCCCCAAGTTAAAGGAGAAGGATAAATTGTTGAATGATAGGAAGGTTTCAAGGGAGATGGAAGAGTTCAATAGAGAAAAGGAATATGAAAACTTAAGGAGGAGATTTGAGAGGAAAGCACAACAAGTTTTGCAAGAGCAACTCTTGAAATTAGAAAGAGAGGTAGAGGAGGAAGTTGAGTTTGCATCAAGTAAAGCAGTAGAAAAAGATGTGCTACTTCAACTTGAATCACCTAGAACAATCTGCACACCAAGAACACATTCTTTTGCTTCTTCTTCAGATTCTAAGAATTCTAGCCTTAGAAATATCATAGAAGATCGTGTGTTTAGTACCAAGAGAATTGAGAAAACTACTGATGACAGGCTGTCTCAGAAGAAATTGAGTTCTGAACAGAAGCAGAATTTGGAACAAATTAAGGAGTTGAAGGTAAGGACTAACAAACAGAGGCAACCACTTCATGTCAGCAGAGAAATTCAGAGGAGGAAACCAAAGCATAGCCCCTGCAGGGTCAGAATATATTCTCCAAGGATGGTTTCCAAGGTTGAAACTTGCAAAATAAAGGCTCTAGAAGACATGAGGAAAGCAAAATTAAAGATGAAGAAAGAAAGGGAGGAAATTGTGGAGGAAACACCAGATTTAGATAGCTTTGCTGTGATTAAATGCTCATTAGATCCAAAGCAGGACTTCAGAGATTCAATGATTGAGATGATCATTGAGAAACAGATTAGGCAGCCAGAAGAAATGGAAGAGCTGTTGGCATGTTATCTAACTTTAAATGCTGATGAGTATCATGATCTCATCATCAAAGTATTCCGCAAGGTATGGTTTGACATGAGCCAATATGGTTTGGGTATTAAATCAGACATGCAATGGTGTTACTATGAATAA 1212 0.3812 MMKWGGRKPSSSSSRPSHASPFSWLSKFKQMRINSEPNPAKMKHKEKHISPKYSCGNGDDGAFWRQSFVEGIQEDMKLKSKDIDEHVIPSSSCHGGGRNAKKDRQRESTPKLKEKDKLLNDRKVSREMEEFNREKEYENLRRRFERKAQQVLQEQLLKLEREVEEEVEFASSKAVEKDVLLQLESPRTICTPRTHSFASSSDSKNSSLRNIIEDRVFSTKRIEKTTDDRLSQKKLSSEQKQNLEQIKELKVRTNKQRQPLHVSREIQRRKPKHSPCRVRIYSPRMVSKVETCKIKALEDMRKAKLKMKKEREEIVEETPDLDSFAVIKCSLDPKQDFRDSMIEMIIEKQIRQPEEMEELLACYLTLNADEYHDLIIKVFRKVWFDMSQYGLGIKSDMQWCYYE. 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04921 403 MobiDBLite consensus disorder prediction 79 116 - -
Seca5g04921 403 NCBIfam uncharacterized plant-specific domain TIGR01568 325 386 IPR006458 -
Seca5g04921 403 Coils Coil 134 162 - -
Seca5g04921 403 MobiDBLite consensus disorder prediction 37 56 - -
Seca5g04921 403 MobiDBLite consensus disorder prediction 97 116 - -
Seca5g04921 403 MobiDBLite consensus disorder prediction 38 53 - -
Seca5g04921 403 Pfam Transcriptional repressor, ovate 330 386 IPR006458 -
Seca5g04921 403 MobiDBLite consensus disorder prediction 1 25 - -
Seca5g04921 403 Coils Coil 293 317 - -
Seca5g04921 403 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 155 387 IPR038933 GO:0045892
Seca5g04921 403 MobiDBLite consensus disorder prediction 7 25 - -
Seca5g04921 403 ProSiteProfiles OVATE domain profile. 326 385 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04921 Seca-Chr5 106536692 106537903 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca5g04921 Ovate 1.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04921 - - gmx:102666239 437.958