Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04899 ATGGAAATGCAAATTGAATTTGATCATAATTCCCTGGTGACGTCCATGATGTCATTGGTGGGCTTTGCTATGTTGCTTCTTTTGTACAATGCCCTTGTGTGGAAGCCAGAAAGGCTTCGTTCTAAGTTGAGGAACCAAGGTATCAGTGGTCCTCCACCAACTTTCCTACTTGGAAATATCAGGGAGATCAAGAATTCTCGCCACCAACATGATGCTACTCCTCAACTGATCGGACCCCTTGCTTCTCATGACTGTGCTTCAACCATCTTCCCTTTCTTTCACAAATGGAAGAAGAAATATGGTCAAGTGTACACGTTTTGTCTTGGGAACTTACAAATATTGTATGTGGATGAACCTGAGATGCTGAGAGAGATAACCACATGCACATCTATGGACTTTGGGAAACCTTCCTATCAGCAGAAGGAAAAAGGGCCTCTGCTTGGTCAGGGAGTTATAACTTCAAATGGCACTATATGGGCCCGTCAAAGAAAGATCATAGCTCCAGAACTATACATGGACAAGGTTAAGGGAATGACAACAATGATTGGTGAGTCTGCTACTTGTATACTAAATTTGTGGACTAGTACAATAGAGAAGCAGGCACAAGGTGGTGGTGCAGATATAAAAGTTGATGACTACATGAAAAGATTCTCTGGAGATGTTATTTCAAAAGCATGCTTTGGAAGCAATTACGCCAAAGGAGAAGAAATTTTCTCTAAACTCACAGATCTCCAAGAAGTCTTGTCTAGGAATAAATTGTCCTTTGGGATCCCAGGCATGAGATATCTTCCAACAAAGAGCAATAGAGAAGCATGGGCATTAGAAAAAGAGGTGAGAAAGTGTATACTAGAGGTGGTGAAGAAGAGAAAGGAAAGTTCACATGAGAAGGATCTGTTGCAGATCATTCTTGAGGTTGCTGAGAATAGTGATATCACTAAAGAGACCGCTGAACGCTTTATTGTTGATAACTGTAAGAATATATACTTGGCAGGATATGAGACCACTGCAATTACTGCTACTTGGTGCCTCATGTTGCTGGCTTCCAATCAAGATTGGCAAGATCGTGTTCGTGCTGAAACACTAGAAATTTGTCAGGGTAAAATCCCAGATTATGATATGCTTCGTAAGATGAAGCAGCTAACAATGGTTATTCAAGAAACATTGAGGCTTTATACCCCGGCAGCTGTTATGTCAAGGGAAGCTTTAGAGGACATGAGATTTGGGACACTGTATGTGCCAAAGGGTGTTAACCTTTGGGTAATGATATTAAGTTTGCATACAAATCCTGATGTATGGGGACCTGATTCCTACAAATTCAACCCGGAAAGGTTTGCAAATGGAATCTCAGGCGCTTGTAAGGTGCCACACTTGTATATGCCCTTTGGGGCTGGGCCACGAGTGTGTATTGGACGGGACTTGGCCATGACTGAACTTAAGATGATCCTATCTCTTATTTTATCTAAATTCTCTTTCAGCCTCTCTCCTAAGTACATCCATGCCCCTGCTCTTAAGATGGTTATTGAGCCTCAACATGGAGTGCATTTGTTGGTCAACAAGTTATCATCATAG 1569 0.4175 MEMQIEFDHNSLVTSMMSLVGFAMLLLLYNALVWKPERLRSKLRNQGISGPPPTFLLGNIREIKNSRHQHDATPQLIGPLASHDCASTIFPFFHKWKKKYGQVYTFCLGNLQILYVDEPEMLREITTCTSMDFGKPSYQQKEKGPLLGQGVITSNGTIWARQRKIIAPELYMDKVKGMTTMIGESATCILNLWTSTIEKQAQGGGADIKVDDYMKRFSGDVISKACFGSNYAKGEEIFSKLTDLQEVLSRNKLSFGIPGMRYLPTKSNREAWALEKEVRKCILEVVKKRKESSHEKDLLQIILEVAENSDITKETAERFIVDNCKNIYLAGYETTAITATWCLMLLASNQDWQDRVRAETLEICQGKIPDYDMLRKMKQLTMVIQETLRLYTPAAVMSREALEDMRFGTLYVPKGVNLWVMILSLHTNPDVWGPDSYKFNPERFANGISGACKVPHLYMPFGAGPRVCIGRDLAMTELKMILSLILSKFSFSLSPKYIHAPALKMVIEPQHGVHLLVNKLSS. 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04899 522 PANTHER CYTOCHROME P450 FAMILY MEMBER 25 512 - -
Seca5g04899 522 PRINTS E-class P450 group I signature 217 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04899 522 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04899 522 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04899 522 PRINTS E-class P450 group I signature 97 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04899 522 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04899 522 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04899 522 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04899 522 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04899 522 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04899 522 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04899 522 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04899 522 SUPERFAMILY Cytochrome P450 84 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04899 522 Pfam Cytochrome P450 88 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04899 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Seca5g04899 522 Gene3D Cytochrome P450 37 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04899 Seca-Chr5 106332560 106334369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04899 121 517 Cytochrome P450 AT5G24900 45.833 2.29e-132 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04899 K24544 - tcc:18591116 712.605