Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04883 ATGGCAATGAACAACATCATTTCCTCAACATGTCTCATGCTCCTGTTTCTCCTTCTTCTTCCCTTAGCCTCATGCAACAAAATTAACAAACAGATTTATGTTGTTGAGTTTAGAGAAGACAGTACTAGTGGAGATAAAACACTGCATGAAGTAGAGAATACCCATCACTCTTATTTGCTTTCAGTGAAAGAAAGTGAGGAAGAAGCCCAAGCTTCTCTTCTTTATAGTTACAAACACAGCATCAATGGCTTTGCAGCATTGCTTACTTCAAAAGAAGCCAATAAGCTCTCAGAAATGGAGGGAGTGGTCTCTGTTCACAAGAGTCAGCCAAAGATGTATTCTTTGCACACCACAAGGTCATGGAAGTTTGTGGGGTTAGATGGGCCTTTGAATCCTTGGGGACAAGAATCCAATCAGACAGATATTGGAGATGACTTGTTAACAAGAGCAAAATATGGGGAAAATATCATAGTAGGAATGATTGATAGTGGTGTGTGGCCAGATTCAAAGAGCTTCAGTGATGAAGGAATGGGGCCTGTTCCACAAAAATGGAAAGGAGTGTGCCAAACTGGAACTGCTTTTGATTCATCTCAATGTAATAGAAAGATAATTGGTGCTAGGTACTACTTACATGGTTATGAAAGTGCATTTGGTCCTTTAAATGAAGATGAGGATTACAAATCAGCTCGTGACAAAGATGGACATGGATCTCACACAGCTTCTATAGTTGCAGGCCGTGCAGTTCCAAATGTCTCTGCCATTGGAGGCTTTGCCAGTGGCACTGCCTCAGGTGGAGCTCCCTTAGCTCGTCTTGCCATATACAAAGCATGTTGGCCATTTAAAGGAAAATCAAAACATGAAGGGAACATATGCACAGACATTGATCTCCTCAAAGCCATTGATGATGCTATTGGTGATGGTGTTGATGTGTTAAGCATTTCCATTGGGTTCAAAATGCCTATCCCTTATGAGGATGATGTGATTGCTAAGGGTGCATTACATGCTGTAAGGAAGAACATTGTGGTGGTTTGTAGTGCTGGAAATTCAGGTCCTTCACCTCAAAGTTTGTCAAACCCTGCACCCTGGATTCTCACTGTTGGTGCTAGTACTGTGGACCGTTCCTTTCTTGCTCCAATTAAGCTAAGCAATGGCACAACTATTGAGGGTCGATCAATTACTCCACTCCACATGGAAAATAGCTTCCACCCATTGGTTCTTGCTGGGGATGTTGAACTTCCAGGCGTGCTTAGTACAAATTCTGGGTGCTTTTCAGTACTAGTGTTACCTTTTCTTATTATATTTTGA 1305 0.4176 MAMNNIISSTCLMLLFLLLLPLASCNKINKQIYVVEFREDSTSGDKTLHEVENTHHSYLLSVKESEEEAQASLLYSYKHSINGFAALLTSKEANKLSEMEGVVSVHKSQPKMYSLHTTRSWKFVGLDGPLNPWGQESNQTDIGDDLLTRAKYGENIIVGMIDSGVWPDSKSFSDEGMGPVPQKWKGVCQTGTAFDSSQCNRKIIGARYYLHGYESAFGPLNEDEDYKSARDKDGHGSHTASIVAGRAVPNVSAIGGFASGTASGGAPLARLAIYKACWPFKGKSKHEGNICTDIDLLKAIDDAIGDGVDVLSISIGFKMPIPYEDDVIAKGALHAVRKNIVVVCSAGNSGPSPQSLSNPAPWILTVGASTVDRSFLAPIKLSNGTTIEGRSITPLHMENSFHPLVLAGDVELPGVLSTNSGCFSVLVLPFLIIF. 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04883 434 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 66 409 IPR045051 -
Seca5g04883 434 ProSiteProfiles Serine proteases, subtilase domain profile. 132 434 - -
Seca5g04883 434 PRINTS Subtilisin serine protease family (S8) signature 153 172 IPR015500 -
Seca5g04883 434 PRINTS Subtilisin serine protease family (S8) signature 231 244 IPR015500 -
Seca5g04883 434 Gene3D - 372 420 - -
Seca5g04883 434 CDD Peptidases_S8_3 113 371 IPR034197 -
Seca5g04883 434 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 116 IPR037045 -
Seca5g04883 434 Gene3D Peptidase S8/S53 domain 155 371 IPR036852 GO:0004252|GO:0006508
Seca5g04883 434 SUPERFAMILY Subtilisin-like 141 415 IPR036852 GO:0004252|GO:0006508
Seca5g04883 434 Pfam Subtilase family 153 370 IPR000209 GO:0006508|GO:0008236
Seca5g04883 434 Pfam Peptidase inhibitor I9 33 109 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04883 Seca-Chr5 106149520 106155131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04883 23 432 Subtilisin-like Serine Gene Family AT5G45650 58.473 9.63e-162 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04883 - - gmx:100793064 684.871