Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04823 ATGACTACTCTCACATCCACATCCCTCTTATCCTCTTTCTCCTTCACCCAACTAACCCCATACTTCATATGCTTCATCCTCCTTCTCCTCCTCCTTGAACAGATCTCTTACCTCACCAAGAAGCGCTTCATTCCAGGCCCATCCCTCGTGCTTCCCTTCATAGGCAACGCCATCTCATTGGTGCGCGACCCTACCAAGTTCTGGGACCTTCAATCTTCCCACGCCAAGTCCACCCCACTGGGCTTCTCAGCTAACTACATCATCGGCAACTTCATCGTCTTCATCAGAGACACTGAGCTCTCTCACAAGGTCTTCGCCAATGTTAGGCCCGATGCCTTCCACCTCGTGGGCCATCCTTTCGGCAAGAAGCTCTTCGGAGAGCACAACCTCATCTACATGATGGGCCAAGATCACAAGAATCTCCGCCGTCGGATCGCCCCTAACTTTACCCCCAAGGCCCTCTCCACCTACACCGCGCTACAGCAGATTATCATCCTCAACCACCTCAGGTCATGGATCGAAAAAGCCCAAAACCACTCAATTCCTATCCGAGTTCTGGCCCGCGACATGAATCTCGAGACCTCCCAGACCGTCTTCGTGGGCCCCTATTTGGGCCAGAAAGCCCGAGAGAGATTCGAGCGAGATTACTTCCTCTTCAACGTTGGCCTCATGAAGCTCCCAATTGATTTGCCCGGCACCGCGTTTCGGAACGCCAGGCTCGCCGTCGACCGACTCGCCGGAACTCTAGCAACGTGCACGGAGATGAGCAAAGCGAGGATGGAGAAAGGAGAAGAGCCTTCGTGCCTCATCGATTACTGGATGCAAGACACGCTCAGGGAGATTGCGGAGGCGAAGGCCACTGGAGAGACGGCGCCGCCGTTCTCCAGCAACGCCGAGATCGGCGGTTACCTCTTCGACTTCCTCTTCGCGGCGCAGGACGCGTCCACGTCGTCGCTGCTTTGGGCCGTGGCTCTCCTGGACGAGCACCCGGAGGTGCTGGCAAGGGTGAGGGAGGAAGTTGCCGGAATCTGGTCGCCGGAGACTGACGCGCTGATTACCGCGGAGCAGCTCAGGGAGATGAAGTACACGCAGGCGGTGGCGCGTGAGGTGGTGAGATTCCGGCCTCCGGCAACCCTGGTGCCGCACATCGCGGCGGAGAGGTTCCCGTTGACGGATTCATATACGATTCCGAAGGGAACGATTGTGTTCCCGTCGGCGTTAGAGTCGTCGTTCCAAGGGTTCACCGAACCGGACCGGTTCGACCCGGACCGGTTTTCAGAGGAGAGGCAGGAGGACCAAATATTTAAAAGAAACTTTCTGGCGTTTGGGGCTGGGCCCCACCAGTGCGTGGGCCAGAGGTATGCTTTGAATCACCTTGTTCTATTCATCGCGATGTTCGCGACGCTGATTGATTTCAAGAGGGACAGAACGGACGGCTGTGATGAGATCGCTTATGTGCCCACGATTTGTCCGAAAGACGATTGCAGGGTTTTTCTGTCTAAGCGGTGCACAAGGTATCCTTCCTTCCCTGGGGTGGAGGAGCTCGTTAAATGA 1554 0.5624 MTTLTSTSLLSSFSFTQLTPYFICFILLLLLLEQISYLTKKRFIPGPSLVLPFIGNAISLVRDPTKFWDLQSSHAKSTPLGFSANYIIGNFIVFIRDTELSHKVFANVRPDAFHLVGHPFGKKLFGEHNLIYMMGQDHKNLRRRIAPNFTPKALSTYTALQQIIILNHLRSWIEKAQNHSIPIRVLARDMNLETSQTVFVGPYLGQKARERFERDYFLFNVGLMKLPIDLPGTAFRNARLAVDRLAGTLATCTEMSKARMEKGEEPSCLIDYWMQDTLREIAEAKATGETAPPFSSNAEIGGYLFDFLFAAQDASTSSLLWAVALLDEHPEVLARVREEVAGIWSPETDALITAEQLREMKYTQAVAREVVRFRPPATLVPHIAAERFPLTDSYTIPKGTIVFPSALESSFQGFTEPDRFDPDRFSEERQEDQIFKRNFLAFGAGPHQCVGQRYALNHLVLFIAMFATLIDFKRDRTDGCDEIAYVPTICPKDDCRVFLSKRCTRYPSFPGVEELVK. 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04823 517 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04823 517 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04823 517 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04823 517 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04823 517 PANTHER CYTOCHROME P450 26 43 466 - -
Seca5g04823 517 CDD CYP61_CYP710 81 495 - -
Seca5g04823 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Seca5g04823 517 Pfam Cytochrome P450 45 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04823 517 Gene3D Cytochrome P450 35 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04823 517 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04823 517 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04823 517 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04823 517 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04823 517 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04823 517 SUPERFAMILY Cytochrome P450 40 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04823 517 FunFam Cytochrome P450 61 34 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04823 Seca-Chr5 105468284 105469837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04823 15 509 Cytochrome P450 AT2G34500 70.020 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04823 K09832 - gmx:100808148 894.419