Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04821 ATGTGCTCACAATTTTTTTTAATGTTATATATGCAAGTTTATACCGTTGCTGAAGGAAGGCCCGTAAGAGAACATCGTCTTCCTTGTTGTGGACTTGGTTTAGGTTGGCTCTTGTTTATAATTGGTTTCTTTCTTGGCGGTGTTCCTTGGTACATTGGAACTTTCATTCTTCTATGTGTTCAAATGGATTACCGAGAAAAGCCAGGGTTAATTGCATGCACAGTTGCTTCCTTCGTTGTTATGGTAGCCATTACACTTGGTGCCACACATCCAAATATTGCAAAGTTGGCATGA 294 0.398 MCSQFFLMLYMQVYTVAEGRPVREHRLPCCGLGLGWLLFIIGFFLGGVPWYIGTFILLCVQMDYREKPGLIACTVASFVVMVAITLGATHPNIAKLA. 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04821 97 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 11 90 IPR044804 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04821 Seca-Chr5 105448108 105449608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04821 14 89 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 38.136 2.84e-23 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04821 - - ini:109165862 121.709