Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04814 ATGCAAAAGGATCACTATAGTGAGAGACAAGCTACGAAGTTGATAAAAACCATTGTTGAGGTTGTGGAGTCTTGTCACTCTATTGGGGTTATGCATAAAGACCTTAAGCCTGAGAACTTCCTCTTTGATACTGTTGATGAGGATGCTAATATCAAAGCCACCTTTTTTTATACTTCTTTCCTCCACAAAGTCAGCAGCTCACCAATGGCGGAGAAGAAAAGGAATGAAGAAGAAAGAGGAACAGATGGAGACTTGACCGTTAGGGATTGTGTCTAA 276 0.4058 MQKDHYSERQATKLIKTIVEVVESCHSIGVMHKDLKPENFLFDTVDEDANIKATFFYTSFLHKVSSSPMAEKKRNEEERGTDGDLTVRDCV. 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04814 91 MobiDBLite consensus disorder prediction 67 91 - -
Seca5g04814 91 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 66 - -
Seca5g04814 91 Pfam Protein kinase domain 3 54 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca5g04814 91 ProSiteProfiles Protein kinase domain profile. 1 91 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca5g04814 91 Gene3D Transferase(Phosphotransferase) domain 1 2 62 - -
Seca5g04814 91 SUPERFAMILY Protein kinase-like (PK-like) 2 62 IPR011009 -
Seca5g04814 91 ProSitePatterns Serine/Threonine protein kinases active-site signature. 30 42 IPR008271 GO:0004672|GO:0006468
Seca5g04814 91 MobiDBLite consensus disorder prediction 66 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04814 Seca-Chr5 105381350 105381625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04814 1 63 EF-hand Containing Proteins AT1G35670 63.492 1.02e-22 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Seca5g04814 Pkinase 1.5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04814 K13412 - gmx:100806678 102.834