Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04774 ATGAAGAATGGTGGGGGAAACCGGAACTCGATGCAAAAGAATTTGGGGTTGGAAAGGTGTGTAAAAAGTTGCAGGTTGAGATTGGTAAAACATTTAAGGCCTAACCTGAGTAAAGGTCCATTTTCAAATGAGGAAGAGAAGATCATCATACTTCTTCATGCTAAACAAGGAAACAAATGA 180 0.3889 MKNGGGNRNSMQKNLGLERCVKSCRLRLVKHLRPNLSKGPFSNEEEKIIILLHAKQGNK. 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04774 59 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 2 59 - -
Seca5g04774 59 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 59 IPR017930 -
Seca5g04774 59 SUPERFAMILY Homeodomain-like 18 59 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04774 Seca-Chr5 105053292 105053471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04774 2 59 MYB Transcription Factor Family AT3G11440 62.069 1.45e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04774 K09422 - csv:101203510 85.1149