Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04769 ATGCACTTGCAGATATTCCAATGGTTGGCAAGTATGCCTTTGGAGCTGGAGGGATATATACGCCCTGGGTGTACGATCCTGACAGCTTTTATTGCAATGCCAAAAATCATGTGGATAAATTTACTCAATGACCCTCTGTACTTTGTGCGTGATCTTGTTGCTCCCAGAAAGATGCTATCTGGAAGAGGCACCACACTAATTTATCTGAATGACATGATCTTCCGTGTTATGAAAGATGGAACTTCTGTGACAAAAGTCGAGGTAAACATGCAGGCACCAAGACTTCACTATGTTCACCCCACATGCTTTGAAGCTGGCAAACCCATGGAATTTGTTGCTTGTGGAAGTAACTTGCTGCAGCCTAAGTTTCGGCTTCTTGTATCTTTTTCTGGAAAATATCTGAAGTATGAGTATTGCGTTCCATCTCCACATAACAGGACTGAAGACGATATTTATTGTTCTTTTGACAATCAGTTATACAAGATATGTGTCCCTCATACAGAGGAAAATTTCTTTGGGCCTGCATTTATTGAGGTGGAGAACGAATCTGGGTTATCAAACTTTATTCCTGTACTCATTGGGGATAAAGAAATTTGCACTGAAATGAAGACTTTGCAGCAAAAATTAGATATATTGCCCCGTTCTAAACAATTCCAGTCTGCATCTGGTGGTTCTATCTGCAGCTCATGTGAAGCTTTTGCACTAAGACACACATCCTCATCAGACTTACTTGTAGATATAGCATGGTTGCTGAAGGATCCAACTTCCGGAAATTTTGACAGAGTGATGACAGCTTCACAAATTCAAAGATATTGTTATCTGTTAGATTTTCTAATATGCAACGATTCAACAGTCATTTTGGGAAAAATATTACCAAATTTGATAACCTTAATAGAAAGCATGAAATCCAATTTTGTGATTAGTAGGATTAGTGATGTTGATCTGATGCAACTACTAAAATGCATGCAAAATGCTAGGGATGCCATTTATCAAAAACATCAGAAAGGTGGAGGTGTAGTTGTGCACTCAGAAACGGAACACTTTGAACTAGCTCAGAGCATCTGCCAAGATAACATGCTATCAGTTGTTAAAGTCAACTGTCAGGGTATCCCAACGGGAGCAGATGCAAAGTTGGGAGTTCTGAGAAATCCCACTTCTAATGACAAAAATGAAAGCATACCACTTTTGAAGAGGGAGGTTATAATGAATGTGGAAGAGGTCCCTAGAAGATGTGACCGTCGGTATCTTGCCAGGGGATTCTTGAGCTCTCGACCAGCTATTTTTGTGGTTGTTTCGGTTGCTGTTTGTCTAGGGGTATGTGTATCCATACTTCATCATGGGAGGGTTAGTGAGTTGGCATTATCCATTAGAAGGTGCTTGTTTAACTATTAG 1392 0.4001 MHLQIFQWLASMPLELEGYIRPGCTILTAFIAMPKIMWINLLNDPLYFVRDLVAPRKMLSGRGTTLIYLNDMIFRVMKDGTSVTKVEVNMQAPRLHYVHPTCFEAGKPMEFVACGSNLLQPKFRLLVSFSGKYLKYEYCVPSPHNRTEDDIYCSFDNQLYKICVPHTEENFFGPAFIEVENESGLSNFIPVLIGDKEICTEMKTLQQKLDILPRSKQFQSASGGSICSSCEAFALRHTSSSDLLVDIAWLLKDPTSGNFDRVMTASQIQRYCYLLDFLICNDSTVILGKILPNLITLIESMKSNFVISRISDVDLMQLLKCMQNARDAIYQKHQKGGGVVVHSETEHFELAQSICQDNMLSVVKVNCQGIPTGADAKLGVLRNPTSNDKNESIPLLKREVIMNVEEVPRRCDRRYLARGFLSSRPAIFVVVSVAVCLGVCVSILHHGRVSELALSIRRCLFNY. 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04769 463 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 53 288 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04769 Seca-Chr5 104990445 104997046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04769 4 457 SBP-box Gene Family AT5G18830 43.750 6.69e-119 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04769 - - gmx:100776034 720.694