Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g04762 | ATGATAAAAGATTGTCCTTCTAGAGCCAGACGACCACGACCTGGATTTTCTGATTCATTTTCAAGTATTGGTTTATTAATTTATTGTTCTGATGAGAGAATGAAAACCATTACCATGTTAGACTTGGCAGCTTTAGAGATTGAGGAGGGAGGCCTACATGAGGAATCTCCTAGAAGTCAAGAGTCTGAAACGCCAAGTTCTAAGGCAAGTACTTCTGATTCTGAGGGTCAAGCAGCTTTAAGAGACAATAACAATAACCAGTGGCGTGGTTTCTTTAAATTACTCAAGAAAGGATCTCAAATGCCCTTCCAAACTTTTCATCCACTTAAAAATGTTCCTAAGCTAACTAGAAGAAAAAGTAAAAGAATCAGGGAGGATCTCATTCCATCTCTCAATTCTCCTGCTCTTCAGTCATCTTTTGACTCTGAGTTTTGCTACTTCAAATCTTCCTGGAAAAATTTCACTCTCTTAGAGATCAAGGCTGCAACCGATGACTTTAGCCATGATAATTTAATTGGGGAGGGAGGCTATGCTGAAGTTTACTTAGGCAAATTGGAAGATGGAAACTTTGTTGCCATTAAACGGCTTACAAGGGGGTGCCAAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGCATTATAGTGCACGTGGACCATCCCAATATTGCTAGATTGATTGGATATGGTGTTGAAGGAGGAATGTTTCTTGTTCTTCAGTTGTCTCCACATGGAAGCCTGTCATCCATACTTTATGGACCTAGGGAGAAACTGAATTGGAACCTCAGATATAAGATTGCTTTGGGGACTGCTGAGGGCCTTCGCTATCTGCATGAGGGATGTCAAAGAAGGATTATTCACAAAGATATCAAAGCTTCTAATATACTACTCTCAGAGGATTTTGAGCCTCAGATATCTGATTTTGGGCTTGCCAAGTGGTTACCTGACCAATGGACTCACCACACTGTCTCCAAAGTAGAAGGCACATTTGGCTACCTTCCTCCTGAATTCTTCATGCATGGTATAGTAGATGAAAAAACTGATGTCTATGCTTATGGGGTGCTATTATTGGAGCTCATTACTGGAAGACAAGCTCTGGATAGCTCACAGAAAAGTCTGGTGATGTGGGCAAAACCTTTGTTATCTAGTAATAACACCAAAGAGCTTGTTGATCCAATTTTGGCTGGTGCTTATGATGAAGAGCAGATGAAACTTGTAATCTTAACAGCTTCTCTGTGTATAGATCAGTCTTCAATGCAGCGACCACATATGAGCCAGGTGTTACAAATACTAAAAGGTGAAGAAGAAAGCTTGAAAACGATGAAAGAAAGGCAGAAGTCAAAACTTCAGCGTACATACTCTGAAGAACTCTTAGATGCAGAAGAGTACAACTCAACCAAGTTGTTGAATGAGAGGGATCGACACATGGAGACTATTTTAGGCTCCAGTAACTCAATTAAAGAAGAAAGCAATACAAACTAG | 1482 | 0.4022 | MIKDCPSRARRPRPGFSDSFSSIGLLIYCSDERMKTITMLDLAALEIEEGGLHEESPRSQESETPSSKASTSDSEGQAALRDNNNNQWRGFFKLLKKGSQMPFQTFHPLKNVPKLTRRKSKRIREDLIPSLNSPALQSSFDSEFCYFKSSWKNFTLLEIKAATDDFSHDNLIGEGGYAEVYLGKLEDGNFVAIKRLTRGCQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLNWNLRYKIALGTAEGLRYLHEGCQRRIIHKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLSSNNTKELVDPILAGAYDEEQMKLVILTASLCIDQSSMQRPHMSQVLQILKGEEESLKTMKERQKSKLQRTYSEELLDAEEYNSTKLLNERDRHMETILGSSNSIKEESNTN. | 494 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g04762 | 493 | MobiDBLite | consensus disorder prediction | 51 | 81 | - | - | |
Seca5g04762 | 493 | MobiDBLite | consensus disorder prediction | 62 | 81 | - | - | |
Seca5g04762 | 493 | FunFam | receptor-like cytosolic serine/threonine-protein kinase RBK2 | 243 | 445 | - | - | |
Seca5g04762 | 493 | Gene3D | Transferase(Phosphotransferase) domain 1 | 243 | 459 | - | - | |
Seca5g04762 | 493 | FunFam | Receptor-like cytosolic serine/threonine-protein kinase RBK2 | 136 | 240 | - | - | |
Seca5g04762 | 493 | SMART | serkin_6 | 166 | 406 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g04762 | 493 | ProSiteProfiles | Protein kinase domain profile. | 166 | 438 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g04762 | 493 | PANTHER | OS08G0249100 PROTEIN | 55 | 465 | IPR046958 | - | |
Seca5g04762 | 493 | Pfam | Protein tyrosine and serine/threonine kinase | 169 | 430 | IPR001245 | GO:0004672|GO:0006468 | |
Seca5g04762 | 493 | ProSitePatterns | Protein kinases ATP-binding region signature. | 172 | 194 | IPR017441 | GO:0005524 | |
Seca5g04762 | 493 | Gene3D | Phosphorylase Kinase; domain 1 | 130 | 240 | - | - | |
Seca5g04762 | 493 | SUPERFAMILY | Protein kinase-like (PK-like) | 146 | 431 | IPR011009 | - | |
Seca5g04762 | 493 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 285 | 297 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g04762 | Seca-Chr5 | 104925135 | 104928801 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g04762 | 137 | 435 | Receptor kinase-like Gene Family | AT1G53420 | 40.065 | 1.89e-69 | 237 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VI | Seca5g04762 | PK_Tyr_Ser-Thr | 5.5e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g04762 | - | - | lja:Lj6g3v1915960.1 | 831.632 |