Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04689 ATGATATCTTCAATCAAATGCACAACATCATCTCTCACCTGCTCTGCTTTCTCAAGCAGAAAGCTTCCTGTCCCAAGGCCTCAACTTTCCACATTACCCACCATTCAGAATGTTGAACAAAACATGGCTCCCTCTCTGTTGTGTTCCCAGAAACCTCTCTACCTTTCATCCACTGACAACTTGGTATTCCTCACAAATCCCAGAAGAAGGAACGTGACAGAGTGCCAGGCCTATGAGGCGGATAGGTCACGGCCACTAGAGATTAACATTGAGCTGCCTGGTCAAGAGGCAGCTCAGAGGCTCAAAATTGGGCTCTATTTTGCTACCTGGTGGGCTTTGAATGTGGTCTTCAACATATACAACAAGAAAGTTTTGAATGCTTTTCCTTACCCATGGCTTACTTCCACTTTGTCCCTAGCTGCTGGCTCTCTCATGATGTTAATCTCGTGGGCCACCAGGGTTGCTGACGTCCCAAAAGTTAATTTTGATTTCTGGAAGGCCCTGTTTCCTGTTGCGGTGGCACACACAATTGGGCATGTTGCTGCAACTGTGAGCATGTCCAAAGTTGCAGTTTCATTCACTCACATCATCAAGAGTGGAGAGCCTGCTTTCAGTGTCCTGGTATCAAGGTTCTTGCTTGGAGAAGCATTCCCCATGTCGGTTTACATGTCACTTGTGCCAATTATTGGTGGTTGTGCATTAGCTGCTGTGACAGAGCTCAATTTCAATATGATTGGTAGGAGGACTATTTACTGA 756 0.4603 MISSIKCTTSSLTCSAFSSRKLPVPRPQLSTLPTIQNVEQNMAPSLLCSQKPLYLSSTDNLVFLTNPRRRNVTECQAYEADRSRPLEINIELPGQEAAQRLKIGLYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLMMLISWATRVADVPKVNFDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPMSVYMSLVPIIGGCALAAVTELNFNMIGRRTIY. 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04689 251 Pfam Triose-phosphate Transporter family 101 246 IPR004853 -
Seca5g04689 251 PANTHER SOLUTE CARRIER FAMILY 35 102 246 - -
Seca5g04689 251 SUPERFAMILY Multidrug resistance efflux transporter EmrE 143 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04689 Seca-Chr5 104171958 104173244 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04689 20 246 Antiporters AT1G61800 70.175 6.56e-112 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04689 K15283 K05350 gmx:100804205 427.557