Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04688 ATGGGGGCGATGATATCAAATTTGGCATTTGTCTTCCGGAATATATTCTCAAAGAAAGGGATGAAGGGGATGTCTGTTAGTGGAATGAACTACTATGCTTGTCTTTCCATATTGTCTCTATTAATTCTCACACCTTTTGCCATTGCTGTGGAGGGTCCCAAGGTGTGGACTGCAGGATGGCAAACAGCTGTGTCTCAGATTGGCCCCAATTTTGTATGGTGGGTGGCTGCCCAGAGTGTCTTCTACCACTTGTATAATCAAGTCTCTTACATGTCCCTTGATCAGATTTCTCCTTTAACATTTAGCATAGGGAACACAATGAAGAGAATTTCTGTAATTGTCTCTTCCATCCTTATCTTTCACACGCCAGTTCAACCCATCAATGCTCTTGGGGCTGCCATTGCAATTCTTGGCACCTTCCTCTATTCACAGGTGACAACTGACCTGTTTTTGTTGATTCTGTGA 465 0.4323 MGAMISNLAFVFRNIFSKKGMKGMSVSGMNYYACLSILSLLILTPFAIAVEGPKVWTAGWQTAVSQIGPNFVWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSILIFHTPVQPINALGAAIAILGTFLYSQVTTDLFLLIL. 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04688 154 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 143 - -
Seca5g04688 154 Pfam Triose-phosphate Transporter family 1 143 IPR004853 -
Seca5g04688 154 PANTHER SOLUTE CARRIER FAMILY 35 2 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04688 Seca-Chr5 104170445 104171829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04688 1 150 Antiporters AT1G61800 86.000 4.91e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04688 K15283 K05350 gmx:100790658 273.863