Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04640 ATGGACAAGGGATGGGGACTCACTCTTGATTCTTGTTCTTCTCCTTCCCACCCTTTCTTTCCTTCCAAACAGCCATCTGCACCTCTGTCCAATCTCACACACGATAGGATGTTCCCCATTTTGGGATTCCCAGTCAACCTTAGCCGCGCCACCAACATGGAAGACGATGACAACCGGAAAGTGCTCGGTGAAGTGGACTTCTTCTCTGACAGAACCAAGTCATCACCCCCACACGATGACCATGTTAAACCCAACTTCATCGCTACTTCCGTCAAGAAGGAGATTTCTCCCGATGAAAAACCTCTTAATCTCCACCTAAATACTGGTCTGCAACTTGTTACTGCAAACACTGGAAGTGACCAATCTACGGTGGATGATGGCGTTTCATCAGATGCTGAAGATAAGCGAGCGAAGACCTCTGAGCTTGCTCAGTTGCAAGTGGAGCTTGAACGCATGAATGCAGAGAACAAGAAACTGAAAGAGATGCTCAGCCATGTGAGCGGTAACTACACGGCTCTGCAGATGCATCTTGCCGCATTAATGCAAAAGAACCAGCGCACAGAGAGCACTGAAAATGAGGGAAAAGGCGAGGAGAAAAACCATGGAGGAATGGTACCGAGACAGTTTCTTGAGATTGGTCCCAGTGGAAGGACTGAAGTAGATGATCAAGTATCCAATTCTTCTTCAGATGAAAGAACGCGATCGAACACGCCTCAAAACAATCACGCTGAAGTTGGAGCAAGAGATCACCACATGATCAGAAACAATAATGGTAAAACTGAATTGAGTAGAGAGGAGAGTCCAGACTCAGAATCACAAGGTTGGGCTTCCAATAAGCTTCAGAAATTGAACCCCTCCAACTCCAATTCTATCGATCAATCCACTGCAGAAGCCACAATGAGAAAAGCTCGTGTCTCAGTTCGTGCCCGATCAGAAGCTTCCATGGTATGTATTATCATTATCATTCACCGATTAATTAATTGA 984 0.4593 MDKGWGLTLDSCSSPSHPFFPSKQPSAPLSNLTHDRMFPILGFPVNLSRATNMEDDDNRKVLGEVDFFSDRTKSSPPHDDHVKPNFIATSVKKEISPDEKPLNLHLNTGLQLVTANTGSDQSTVDDGVSSDAEDKRAKTSELAQLQVELERMNAENKKLKEMLSHVSGNYTALQMHLAALMQKNQRTESTENEGKGEEKNHGGMVPRQFLEIGPSGRTEVDDQVSNSSSDERTRSNTPQNNHAEVGARDHHMIRNNNGKTELSREESPDSESQGWASNKLQKLNPSNSNSIDQSTAEATMRKARVSVRARSEASMVCIIIIIHRLIN. 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04640 327 MobiDBLite consensus disorder prediction 219 243 - -
Seca5g04640 327 MobiDBLite consensus disorder prediction 188 204 - -
Seca5g04640 327 MobiDBLite consensus disorder prediction 269 297 - -
Seca5g04640 327 MobiDBLite consensus disorder prediction 183 297 - -
Seca5g04640 327 Coils Coil 135 169 - -
Seca5g04640 327 MobiDBLite consensus disorder prediction 244 268 - -
Seca5g04640 327 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 108 316 IPR044810 GO:0003700
Seca5g04640 327 MobiDBLite consensus disorder prediction 117 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04640 Seca-Chr5 103681060 103683571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04640 1 316 WRKY Transcription Factor Family AT1G62300 43.391 2.43e-55 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04640 - - ccaj:109803638 413.305