LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca5g04571	ATGGAAAAAGGTTTTGAGGAATTGTCAAATGGTGATGGTAATAGTGGCACCAATGAAGTATGTGGTAGTGTTGAGGCATGTGAGGGACCTAAAAATGTTACTGAGTTGACAGTTGAGGAGATTATGTCTCTTGAATTTGATTCAGAGGAAGATGCTTTTCATTTTTACACTAATTATGCTAAAGTAGTTGGATTTTCAGTAAGAAAAGATGACGTCTATCATGATGATCGGTATGGGATTGTTATGAGAAACATGGTATGTAATAGGCAAGGAGAGAGGTCTGAGAAGAACATGCAAAGGAAGGATAGGTGTCGTGAACCAAGGGCCATTACCTGCACACGTTGCCATGCAAGGCTTCGTGTTCGTTTAGGTTACTTGAGTGGAAAATGGGCAGTTACTCATTTTGAGCCCAATCATAATCACGAGTTGACCCCATCAACATATGTCCATTTGATTTCTTCAAATAGAGGTCTTTCTGATGGTGATAAGGCTCAAGTGAATAGTTTGCACATGTATGGTGTTTGTACTTGTCATATTTTGGGTTTCATTTTAGGTCAGAAAGGGGGGTATGCAGATCTTGGCTTTTGCAAAAAGGATTTGTACAATCATATAGATAAGGACAAAAAAATTAAGGATGGTGATGCTTTTGCTGCCTTATGTTACCTTCAGGCAAAATCTTATAATGACCCAATGGTGTTCACAAAATTTACGATTACAGATGATGGAAATCTTAAAAATCTGTTTTGGACTGATGCTAGTAGTAGGATTGATTATCACTGTGTTTGGGGATGTAGTGACTTTTGA	804	0.3806	MEKGFEELSNGDGNSGTNEVCGSVEACEGPKNVTELTVEEIMSLEFDSEEDAFHFYTNYAKVVGFSVRKDDVYHDDRYGIVMRNMVCNRQGERSEKNMQRKDRCREPRAITCTRCHARLRVRLGYLSGKWAVTHFEPNHNHELTPSTYVHLISSNRGLSDGDKAQVNSLHMYGVCTCHILGFILGQKGGYADLGFCKKDLYNHIDKDKKIKDGDAFAALCYLQAKSYNDPMVFTKFTITDDGNLKNLFWTDASSRIDYHCVWGCSDF.	268

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca5g04571	267	PANTHER	OS01G0519700 PROTEIN	38	260	-	-
	Seca5g04571	267	MobiDBLite	consensus disorder prediction	1	20	-	-
	Seca5g04571	267	Pfam	FAR1 DNA-binding domain	54	144	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca5g04571	Seca-Chr5	103049177	103051703	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Seca5g04571		FAR1	2e-21	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca5g04571	-		-	ccaj:109792835	254.603