Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04502 ATGTGGCTGGGAAAGCATTCAACTTTCTTCTTCTCATCACTCATTCTTCTTTTTCTGTTTCAAGCAGCACCAGCTTTTGCTGCAAAAAAATCATACATAGTGTACCTGGGAGCGCATGATCATGGTCCAGGAGTCACACAAGCTGATTTTGATCAAGTTACAGAAAGTCATCATGCATTACTTGGATCCTATTTGGGAAGTTCTGAGAAATCAAAAGAAGCAATGCTTTATTCTTACACAAAGCACATCAATGGCTTTGCAGCTGTCCTAGAAGAGGAAGAGGCTGCTAAACTTGCAAAGCATCCAAATGTTGTGTCAGTATTCTTAAACCAAGGAAGAAAACTACAAACTACACATTCCTGGGAATTCATGTCTCAGGAATATAATGGTCTCACTCTTCCCAATTCCTTGTTTCAAAAGGCCAGATTTGGTGAAGATACTATTATAGGACACCTTGACACTGGTAATTTGCTTTCCACTGCTTGTTGTATTATAGGTGCATGGCCAGAATCTCCCAGCTTTAGTGATGAAGGGATAGGACCCATTCCTTCAAGGTGGAAAGGAACCTGTGAGAATGATATCACTGGCTTCCGTTGTAACAGGAAGCTCATAGGGGCAAGGTACTTCAACAAAGGGTATGCTTCTTATTTAACTGAAGAGTCAGTGAGAAACAGTACATTTAACTCAGCAAGAGACTATGAGGGTCATGGTTCTCACACTCTATCAACATTAGGAGGGAACTTTGTTGAGGGAGCAAATGTCTTAGGCATGGGAAATGGAACTGCCAAAGGTGGTTCTCCTAAAGCCAGGCTTGCTACTTACAAGGTCTGCTGGCCACCAATTGATGACAATGAGTGCTTTGATTCTGATATCTTGGCAGCCTTAGATACAGCTATATCTGATGGGGTTGATGTTATTTCCCTTTCTATTGGAGGGTCTCCTATGGATTATTTCAATGATGCTATTGCTATTGGAGCATTTCATGCCACTATGAATGGTATCACTGTAGTATGTGCTGGTGGAAATTCTGGACCAGGACCTGGAACTGTCTCAAATACTGCACCTTGGATCATTACAGTTGGTGCAAGTACCTTGGACAGAAAGTTTGAGTCTATTGTTGAACTCTCCAATGGACAGGTTTTCAAGGGATATACTCTTTCAAATGCTGTGCCAGAAGACAAACTTTACCCACTCATTAGAGCTGATGTGGCCAAAAAGGATGAGGCACAAGATTATGAAGCTGTGTTTTGTAAGGCAGGAACAATTGACCCAGAGAAGGCCAAGGGAAAAATATTGGTTTGTCTTAGAGGTGACAATGAAAGAGCAGAAAAGAGCCTTGTTGCTTTTGAGGCTGGTGCAGTTGGGATGATTCTTTACAATGATGAGTATACCCCTGAAGACTATAAGTCCCTGGCTACTCCTCATTTCCTTCCAACATCAGAAGTTACCTATAATGAGGGTCTTGCCATTTTATCCTACATCAATTCAACCATGAACCCAATGGCATATTTGCATCCACCCAAAACTTTGTTGCAGATAAAGCCTTCTCCAACTATGGCATTTTTCTCCTCAAGAGGCCCCAACATTGTCACACCAGAGATCCTCAAGCCTGATATTACTGCTCCTGGTGTGAACATTATTGCTGCCTATTCACAAGGTACCAGCCCTTCAGATTTGGACTCTGATAACCGGAGGATTCCTTTTATCACCATGTCTGGAACATCCATGGCCACCCCTCATGTGGCTGGAGTTGTTGGTCTTCTCAAGACACTACACCCTAACTGGAGTCCAGCAGCTATCAAATCTGCAATAATGACAACTACTATGACATGGGACAACACTTTTAAACCAATGGTTGATGATAGTTTAGCTATGGCAACACCATATGACTATGGCACTGGACACATCACACCAAATTGGGCAATGGATCCTGGTTTGGTCTATGACTTAACATCCACTGATTACCTAAACATGCTTTGTGCAAGTGGTTATAACCAAACTCAGATAGCAAGTTTCTATGGTGCTCCTTATAATTGTCCTTATGTGGTCAAAATCCTGGACTTCAACTACCCTGCAATAGTAATACCAAAACTGTATGGCACAGTTACTTTGACTAGGAGGGTTAAAAATGTTGGTAAGCCAGGCATTTATGCAGCAAGGATCCGTGTACCACCAGGTCTTTCAGTATCTGTGGAGCCTAAGATCTTGAAATTTGACAGGATTGATGAAGAGAAAAGCTTTAGCTTAACATTTGAAGTGACAAGACCAGGTGTTGCTACAGTCTATGGGGAGCTAATTTGGTCAGATGGCTTACATTATGTGAGGAGTCCAATTATAGTTGGTGGTGTTATGGCTTAG 2358 0.4203 MWLGKHSTFFFSSLILLFLFQAAPAFAAKKSYIVYLGAHDHGPGVTQADFDQVTESHHALLGSYLGSSEKSKEAMLYSYTKHINGFAAVLEEEEAAKLAKHPNVVSVFLNQGRKLQTTHSWEFMSQEYNGLTLPNSLFQKARFGEDTIIGHLDTGNLLSTACCIIGAWPESPSFSDEGIGPIPSRWKGTCENDITGFRCNRKLIGARYFNKGYASYLTEESVRNSTFNSARDYEGHGSHTLSTLGGNFVEGANVLGMGNGTAKGGSPKARLATYKVCWPPIDDNECFDSDILAALDTAISDGVDVISLSIGGSPMDYFNDAIAIGAFHATMNGITVVCAGGNSGPGPGTVSNTAPWIITVGASTLDRKFESIVELSNGQVFKGYTLSNAVPEDKLYPLIRADVAKKDEAQDYEAVFCKAGTIDPEKAKGKILVCLRGDNERAEKSLVAFEAGAVGMILYNDEYTPEDYKSLATPHFLPTSEVTYNEGLAILSYINSTMNPMAYLHPPKTLLQIKPSPTMAFFSSRGPNIVTPEILKPDITAPGVNIIAAYSQGTSPSDLDSDNRRIPFITMSGTSMATPHVAGVVGLLKTLHPNWSPAAIKSAIMTTTMTWDNTFKPMVDDSLAMATPYDYGTGHITPNWAMDPGLVYDLTSTDYLNMLCASGYNQTQIASFYGAPYNCPYVVKILDFNYPAIVIPKLYGTVTLTRRVKNVGKPGIYAARIRVPPGLSVSVEPKILKFDRIDEEKSFSLTFEVTRPGVATVYGELIWSDGLHYVRSPIIVGGVMA. 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04502 785 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 780 IPR045051 -
Seca5g04502 785 ProSiteProfiles Serine proteases, subtilase domain profile. 120 642 - -
Seca5g04502 785 Pfam Fibronectin type-III domain 687 780 IPR041469 -
Seca5g04502 785 SUPERFAMILY PA domain 410 499 IPR046450 -
Seca5g04502 785 ProSitePatterns Serine proteases, subtilase family, serine active site. 573 583 IPR023828 -
Seca5g04502 785 FunFam subtilisin-like protease SBT1.5 366 511 - -
Seca5g04502 785 CDD PA_subtilisin_like 373 504 - -
Seca5g04502 785 SUPERFAMILY Subtilisin-like 115 646 IPR036852 GO:0004252|GO:0006508
Seca5g04502 785 CDD Peptidases_S8_3 114 607 IPR034197 -
Seca5g04502 785 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 116 IPR037045 -
Seca5g04502 785 Gene3D - 659 782 - -
Seca5g04502 785 Pfam PA domain 416 490 IPR003137 -
Seca5g04502 785 FunFam Subtilisin-like protease SBT5.3 20 116 - -
Seca5g04502 785 Gene3D Peptidase S8/S53 domain 166 655 IPR036852 GO:0004252|GO:0006508
Seca5g04502 785 PRINTS Subtilisin serine protease family (S8) signature 232 245 IPR015500 -
Seca5g04502 785 PRINTS Subtilisin serine protease family (S8) signature 42 61 IPR015500 -
Seca5g04502 785 PRINTS Subtilisin serine protease family (S8) signature 572 588 IPR015500 -
Seca5g04502 785 Pfam Subtilase family 216 612 IPR000209 GO:0006508|GO:0008236
Seca5g04502 785 Pfam Peptidase inhibitor I9 31 115 IPR010259 -
Seca5g04502 785 FunFam Subtilisin-like protease SBT1.5 146 379 - -
Seca5g04502 785 Gene3D - 366 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04502 Seca-Chr5 102456702 102460643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04502 15 780 Subtilisin-like Serine Gene Family AT5G59810 58.182 0.0 900
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04502 - - gmx:100808488 1055.05