Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04475 ATGTATAGACTACCTTTTGTTGAGTGCCTGATGTTTGGTGCTCTCATATCAGCAACCGATCCTGTTACTGTTTTGTCCATATTTCAGGAGTTGGGCACAGATGTCAATCTATATGCCTTGGTTTTTGGAGAATCTGTTTTGAATGATGCTATGGCAATTTCTTTGTACAGGACAATGTCAATGGTTAAAACTCATCCATCTGGACAAAATTTATTCATGGTGGTTGTTAGATTTTTAGAGACTTTTGTTGGGTCAATGTCTGCAGGTGTTGGAGTTGGGTTTATATCTGCTTTGCTATTTAAGTATGCAGGGCTGGATATTGACAACCTTCAGAACTTGGAGAGCTGTCTTTTTGTTCTTTTCCCATATTTCTCGTACATGCTTGCTGAAGGCCTTGGTCTGTCTGGTATTGTATCGATACTGTTCACAGGAATTGTCATGAAGCACTATTCGTATTCAAATTTGTCACAAAGTTCTCAAAGATTTGTCTCTGCATTTTTTGAGCTGATATCATCATTAGCAGAAACATTTGTATTTATATACATGGGCTTTGATATTGCTATGGAGCAACATAGCTGGTCTCATGTTGGATTTATATTCTTCTCCATTATATTCATTGGAATTGCAAGAGCGGCAAATGTCTTCTCTTGTGCTTATCTGGTCAATCTGGCCAGACCTGCTCATCGAAAGATACCTCCAAAACACCAAAAAGCACTTTGGTATAGTGGACTTCGAGGGGCAATGGCCTTTGCACTTGCTCTGCAATCGGTTCATGATCTTCCAGAAGGACATGGACAGACAATCTTTACTGCAACTACAGCAATAGTTGTTTTGACGGTATTGCTGATTGGTGGTTCAACAGGTACCATGCTGGAAGCTCTAGATGTTGTTGGTGGTGACAGTCATGACGATAGCCCTTTGGCTTCAGTTGGTACCATCTCAAGTTACGACGGGAACAATGGTTATATTGCTCCTTCATATAGCGAAGAATCATCATCATCTGGGAACAAAATCAAGATGAAGCTAAAAGAATTTCACAAGAGTGCTGCGTCTTTTACAGCATTAGATAGAAACTACCTCACCCCATTCTTTACTAGTCAAAATGGAGATGAAGATGAGGAAGCCGAGCCTTTTACTTCTACAAGATCCGGATTTCACGGCCAGAACCATTATTCATCGTGA 1182 0.4027 MYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSMVKTHPSGQNLFMVVVRFLETFVGSMSAGVGVGFISALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGIVMKHYSYSNLSQSSQRFVSAFFELISSLAETFVFIYMGFDIAMEQHSWSHVGFIFFSIIFIGIARAANVFSCAYLVNLARPAHRKIPPKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALDVVGGDSHDDSPLASVGTISSYDGNNGYIAPSYSEESSSSGNKIKMKLKEFHKSAASFTALDRNYLTPFFTSQNGDEDEEAEPFTSTRSGFHGQNHYSS. 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04475 393 Gene3D - 6 58 - -
Seca5g04475 393 MobiDBLite consensus disorder prediction 364 393 - -
Seca5g04475 393 PANTHER SODIUM/HYDROGEN EXCHANGER 1 380 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Seca5g04475 393 Pfam Sodium/hydrogen exchanger family 3 292 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04475 Seca-Chr5 102269251 102276918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04475 10 294 Antiporters AT3G05030 36.093 4.36e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04475 K14724 - gmx:100790830 693.73