Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04463 ATGGGTGAAAGAATCCTAGTATTCCTACTGCTCATTTTCAGTTTTTTGTTGATTGTGGTGGCAAACACAAGCAACCAGGATTACACTGCTCTGCTGACTCTGAAGTATGGGTGGCAGAACACCCCACCTGATTGGGTGGGCTCAGATCCTTGTGGTGATCGATGGACAGGAATTCAGTGCTCCAATTCACGCATTACCAGCTTATCATTGGCAAGCATGGGTTTGTCTGGCCAGCTTTCTTCAGATATTGGATTACTATCTGAATTGCGGATTTTGGATCTGTCTTACAATAGGAATTTAACAGGATCACTTCCCAGTGAAATTGGAAACTTGAAAAAGTTGACAAACTTGCTTCTTATCAATTGTGGTTTCACTGGCTCTATCCCAGATACAATAGGAAATCTAGAACGGCTTGTCTTCCTATCTTTAAATTCTAATAGCTTCAGTGGGCGAATTCCACCTGCTATTGGTACTCTCTCTAATATTTATTGGCTTGACTTAGCTGAAAACCAGCTTGATGGGCCCATCCCAATATCTAATGGAACTGCTCCCGGTCTTGATATGTTGCACCATACAAAGCACTTTCATTTTGGGATGAATAAGCTTTCAGGCAATATTCCTTCTCAACTTTTTAGCTCTGAAATGTCTCTTATACATGCACTTTTTGAAGGCAACCAACTTACTGGCAGCATTCCATCTACACTTGGACTTGTCAAGTCTCTCGAGGTGGTGCGCTTTGATGGTAATTTCTTAAATGGACCTTTGCCTTTGAACCTCAACAATCTTACAAAAGTTACGGATTTGTTCCTGTCTAACAATCGCATACCTGGTCCCCTGCCAAACCTTACTGGAATGAATGCCCTCAGCTACCTGGATGTGAGCAATAATAGTTTTGATCCATCAGTATTTCCACCGTGGTTATCAACTCTACCGTCTTTGACAACATTAATAATGGAAAATACACAACTTCAAGGACAAATTCCTGTTTCTTTGTTCAGCCTGGCACAGTTACAAACAGTGGTGCTGAAAAGCAATCAGCTGAATGGAACTTTAGACATTGGCACAGCCATCAGCAACCAACTGGAACTCCTTGATTTGCAGACTAATTTAATTGAAGCATTTGATCCAAAAATTGATGTCTCCAAAGTGGAGATAATCTGCAGACTAGCGAAAAATCCAGTTTGCCAAGACACAGGAGTTGTACGGACTTATTGCTCCATTGCAAAATCCAATGACTCATACAAAACACCACCGAATAACTGTGTGCCTGCTACCTGTAGCTCAGATCAGATATTAAGCCCCAACTGCAAATGTGCATACCCATATACAGGAACTTTAACTTTCAGAGCTCCTTCCTTCTCAGGCTTGGGAAATGATACTGTCTTTGTAAACCTGGAGTTATCTCTGATGCAGTCTTTTCAACTCTATGAAACACCTGTGAATTCAGTTTCTTTAAGCAATCCAAGGAAAGATACAGACGGAATTCAGTATCTTGAGTTGACATTACAAGTATTTCCATCAGGCCAAGATCGTTTCAATCGATCTGGGATTTCTGGTATAGCCTTTCTGCTTAGCAACCAGACATATAAGCCTCCTGCAATGTTCGGACCATATTATTATATCGCTGATACTTATGAACACTATTTGGATGATTTAGGTCCTGTAGCATCCAGTAAATCTTCAAATATTGGCATCATAGCTGGAGCTGCTGCTGGTGGTTCTGTCCTGCTGGTGTTATTACTCCTTGCAAGTGTTTATGCTTTCCGCCAAAAGAAAAAAGCAAAAAGAGCAACTAGTAAACGCAATCCTTTTGAACAATGGGATCCGGATGAGAGCAACAGTAGCATCCCACAGTTAAAAGGAGCAAGGCGCTTCACTTTTGAAGAGATGCAGAACTGCACCAAAAACTTTTCACAAGTCAACAATATAGGATCTGGGGGTTATGGGAAGGTATTGAATGTTTATCGAGGAACTCTTCCCAATGGAGAGCTAATTGCAGTAAAACGAGCTCAAAAAGAATCAATCCAGGGAGGAGTGGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTCCACCACAAAAATCTTGTTAGCCTTCTTGGTTTCTGCTTTGAGCAAGGAGAACAAATGCTGGTTTATGAGTATGTTGCAAATGGCACTTTGAAGGATGCTCTATCAGGGAGGTCAGGAATTAGATTGGACTGGATTAGAAGGCTAAAAATAGCCCTTGGTGCTGCTAGGGGCCTGGATTATCTGCATGAACATGCCAATCCTCCTATTATACACAGGGACATTAAATCCACTAACATTTTACTGGATGATCACTTGAATGCTAAAGTTTCTGATTTTGGTCTCTCCAAGCCTTTGGGTGATGGTGAAAAAGGTTACATTACCACTCAAGTGAAAGGAACAATGGGCTACTTGGACCCAGAGTATTATATGACTCAACAGTTGACTGAAAAGAGTGATGTTTATAGCTTTGGAGTGCTAATGTTGGAGCTTATAACTGCAAGAAAGCCAATAGAACGAGGGAAATATATTGTGAAACTGGTTAAGAGTGCTATTGACAAGACAAAAGACTTATATGGTCTCAAGGAAATTCTTGATCCAACCATTGATTTAGAGACAACACTGAATGGTTTTGATAAGTTTGTGGATCTGGCATTGCAATGTGTTGCAGAGTCAAGTTCTAACAGGCCTTCAATGAATTACGTGGTGAAAGAAATTGAAAACATGTTGCATTTGGCTGGTTCAAACCCCAATGCTGAATCAGCATCTAGTTCATCTAGTTATAATGTAAGTAAAGGGAGTTCCCTGCATCCTTATGACAATGAGTACTTTGGTTCAAGTGTGCTACTTCCACGTGCATAA 2871 0.4075 MGERILVFLLLIFSFLLIVVANTSNQDYTALLTLKYGWQNTPPDWVGSDPCGDRWTGIQCSNSRITSLSLASMGLSGQLSSDIGLLSELRILDLSYNRNLTGSLPSEIGNLKKLTNLLLINCGFTGSIPDTIGNLERLVFLSLNSNSFSGRIPPAIGTLSNIYWLDLAENQLDGPIPISNGTAPGLDMLHHTKHFHFGMNKLSGNIPSQLFSSEMSLIHALFEGNQLTGSIPSTLGLVKSLEVVRFDGNFLNGPLPLNLNNLTKVTDLFLSNNRIPGPLPNLTGMNALSYLDVSNNSFDPSVFPPWLSTLPSLTTLIMENTQLQGQIPVSLFSLAQLQTVVLKSNQLNGTLDIGTAISNQLELLDLQTNLIEAFDPKIDVSKVEIICRLAKNPVCQDTGVVRTYCSIAKSNDSYKTPPNNCVPATCSSDQILSPNCKCAYPYTGTLTFRAPSFSGLGNDTVFVNLELSLMQSFQLYETPVNSVSLSNPRKDTDGIQYLELTLQVFPSGQDRFNRSGISGIAFLLSNQTYKPPAMFGPYYYIADTYEHYLDDLGPVASSKSSNIGIIAGAAAGGSVLLVLLLLASVYAFRQKKKAKRATSKRNPFEQWDPDESNSSIPQLKGARRFTFEEMQNCTKNFSQVNNIGSGGYGKVLNVYRGTLPNGELIAVKRAQKESIQGGVEFKTEIELLSRVHHKNLVSLLGFCFEQGEQMLVYEYVANGTLKDALSGRSGIRLDWIRRLKIALGAARGLDYLHEHANPPIIHRDIKSTNILLDDHLNAKVSDFGLSKPLGDGEKGYITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELITARKPIERGKYIVKLVKSAIDKTKDLYGLKEILDPTIDLETTLNGFDKFVDLALQCVAESSSNRPSMNYVVKEIENMLHLAGSNPNAESASSSSSYNVSKGSSLHPYDNEYFGSSVLLPRA. 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04463 956 PANTHER RECEPTOR-LIKE PROTEIN 55 38 912 - -
Seca5g04463 956 SUPERFAMILY Protein kinase-like (PK-like) 623 931 IPR011009 -
Seca5g04463 956 Gene3D Phosphorylase Kinase; domain 1 608 715 - -
Seca5g04463 956 SMART serkin_6 637 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca5g04463 956 Gene3D Transferase(Phosphotransferase) domain 1 716 934 - -
Seca5g04463 956 Gene3D Ribonuclease Inhibitor 283 397 IPR032675 -
Seca5g04463 956 Gene3D Ribonuclease Inhibitor 182 282 IPR032675 -
Seca5g04463 956 Gene3D Ribonuclease Inhibitor 23 181 IPR032675 -
Seca5g04463 956 Pfam Protein kinase domain 638 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca5g04463 956 SUPERFAMILY L domain-like 53 406 - -
Seca5g04463 956 FunFam Leucine-rich repeat protein kinase family protein 601 715 - -
Seca5g04463 956 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Seca5g04463 956 MobiDBLite consensus disorder prediction 597 617 - -
Seca5g04463 956 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 716 925 - -
Seca5g04463 956 CDD STKc_IRAK 643 912 - -
Seca5g04463 956 ProSitePatterns Protein kinases ATP-binding region signature. 643 668 IPR017441 GO:0005524
Seca5g04463 956 ProSitePatterns Serine/Threonine protein kinases active-site signature. 760 772 IPR008271 GO:0004672|GO:0006468
Seca5g04463 956 FunFam Leucine-rich repeat protein kinase family protein 182 281 - -
Seca5g04463 956 ProSiteProfiles Protein kinase domain profile. 637 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca5g04463 956 FunFam Leucine-rich repeat family protein 26 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04463 Seca-Chr5 102165446 102172803 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04463 1 954 Receptor kinase-like Gene Family AT5G49760 57.411 0.0 1030
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Seca5g04463 Pkinase 7.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04463 - - gmx:100780344 1409.43