Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04445 ATGCTTCTCCAACCAGAATGGAGGCGTTCAAAGCCAAGCTCAAGTGTTTGGGAACCAGAATGGAGGCGATCAAGACCAACTGCATATCCATGGAACCAAAATTATGGTGTAAGGAAACAGGGAGGGTCGAGTTCCGGTGGTGTTGAAAGAGGCAGAGACCTAAATGCATCTTGGCGAACTGCTCCAGCTCCAGCTCCAGCTCCAGATTATGCAGTTCCCAAACTAGAAAGACTGCAAATATCAAAAGAGTTAGCTACATCATCTTGTACCCTCCAAGAAAAGGATAAAATTTCACCTATTCGAAGACCTGACAATGGTGGCACATTAGCTATTCTGACCAATAGGCTTCTTGTCAATCATTTCCCTGTTAACTTCAATCCTGAGAGCATAATATTGCATTATAATGTTGCTGTCAAACCAAAGGTTTCTTCCAAACCTGGCCAACTTCAGAAATTATCCAAGTCTGATATGTCCATGATTAGAGAGAAATTGGTTTCTGATGATCCTGAGATATTGCCCTTGGAGATGACTGCACATGACGGTGCAAGAAATATCTATAGTGCAGTGCAATTACCAGAAGAGACCTTTACTGAAGAGATCTCTGAAGGAGAGGAAGAAAAGGCCATGTCATATATCGTTTCCATAACACTTGTTAATAAACTCAGGCTTCACAAGTTAATGGACTATCTTTGTGGGAATACCCTCTCCACTCCTAGGGATATTTTACAAGGGATGGATGTGGTGGTGAAAGAGAATCCTGCTAGACTGACGACACTTCTATCCCACAAATCCTCCTTTGGTAATGAAGGATCTTTGGGGGGTTTCAGCATAGTTTAA 837 0.4241 MLLQPEWRRSKPSSSVWEPEWRRSRPTAYPWNQNYGVRKQGGSSSGGVERGRDLNASWRTAPAPAPAPDYAVPKLERLQISKELATSSCTLQEKDKISPIRRPDNGGTLAILTNRLLVNHFPVNFNPESIILHYNVAVKPKVSSKPGQLQKLSKSDMSMIREKLVSDDPEILPLEMTAHDGARNIYSAVQLPEETFTEEISEGEEEKAMSYIVSITLVNKLRLHKLMDYLCGNTLSTPRDILQGMDVVVKENPARLTTLLSHKSSFGNEGSLGGFSIV. 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04445 278 Pfam N-terminal domain of argonaute 115 249 IPR032474 -
Seca5g04445 278 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 115 258 - -
Seca5g04445 278 MobiDBLite consensus disorder prediction 1 52 - -
Seca5g04445 278 MobiDBLite consensus disorder prediction 27 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04445 Seca-Chr5 102018497 102020811 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04445 119 273 Eukaryotic Initiation Factors Gene Family AT1G48410 26.946 1.57e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04445 K11593 - gmx:100783571 355.91