Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04436 ATGCTATCTTCGAATGTTGTTCCATCATCATCCTCTGTCACTTTCAGCAAACCCAATCACCAGTTTTTCATTAATGCATCTCCCATTTTCAAACCAAATCTTCTCAGCAGGGTTCAGGTCCAACAGAATCTACACTGCTGCAGAGCCACCTCTCAGCTTCATGAATCTGGTCTCAAAAGTTCCAAACTTTCTCTCATGCCCACATCCCAGATCCAACATTCAATCACAAATTTAAGCTCTTTTAACAGATTTCTCTCACACCCATTTGAGTTCTCAGCAAAACCCAGACTCCAAATCGTTAAGGCAGCATCTGATGCTAATCCTGAGGGAGAAAGTGTAGCTCCCACTAATCCCAAATCTAAGAATTTCAAACTTGCACTAGTATTTGGGATGTGGTATTTCCAAAACACTGTCTTCAACATTTACAACAAGAAAGCGTTAAACATATTCCCATTCCCATGGCTTCTTGCCTCTTTTCAGCTCTTTGTTGGGTCCATTTGGATGCTGGTGCTCTGGACCTTTAAGCTTCAACCTTGTCCAAAAATCTCAAAACCTTTCATCATGGCTCTCCTTGGTCCTGCTTTGTTCCACACAATAGGCCACATATCAGCTTGTGTTTCATTCTCCAAGGTTGCTGTTTCCTTCACCCATGTCATTAAATCTGCAGAACCAGTTTTCTCTGTCATTTTTTCTTCTGTCCTTGGTGACAGATATCCCATTCAGGTTTGGCTTTCAATTCTACCTATTGTGCTTGGTTGTTCTTTAGCTGCTGTTACTGAGGTGTCTTTCAATGTACAAGGATTGTGGGGTGCTCTCATTAGCAATGTTGGTTTTGTATTGAGGAACATCTATTCTAAAAGAAGTTTACAAAGTTTCAAGGAAGTTGATGGCTTGAACTTATATGGCTGGATTACTATAATTTCATTGCTCTACCTGTTTCCAGTGGCTATTTTTGTAGAAGGATCCCAGTGGATCCCAGGGTATTACAAGGCAATTGAAGCTATAGGCAAACCATCCACATTTTATATATGGGTGTTGGTGTCTGGGGTGTTCTACCATCTTTATAACCAATCATCTTACCAAGCCCTGGATGAAATTAGCCCATTAACTTTCTCTGTGGGAAACACAATGAAGAGAGTGGTGGTGATTGTATCTTCAGTTTTGGTGTTCAGGAATCCAGTTAGACCTCTTAATGGCCTTGGATCTGCCATTGCCATTCTTGGGACTTTCCTGTATTCCCAGGCAACATCTGCAAAGAAAGCAAAGAAAATTGAAGGTGAAAAGAGTAGTTAG 1293 0.4099 MLSSNVVPSSSSVTFSKPNHQFFINASPIFKPNLLSRVQVQQNLHCCRATSQLHESGLKSSKLSLMPTSQIQHSITNLSSFNRFLSHPFEFSAKPRLQIVKAASDANPEGESVAPTNPKSKNFKLALVFGMWYFQNTVFNIYNKKALNIFPFPWLLASFQLFVGSIWMLVLWTFKLQPCPKISKPFIMALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFSSVLGDRYPIQVWLSILPIVLGCSLAAVTEVSFNVQGLWGALISNVGFVLRNIYSKRSLQSFKEVDGLNLYGWITIISLLYLFPVAIFVEGSQWIPGYYKAIEAIGKPSTFYIWVLVSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSSVLVFRNPVRPLNGLGSAIAILGTFLYSQATSAKKAKKIEGEKSS. 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04436 430 Pfam Triose-phosphate Transporter family 124 413 IPR004853 -
Seca5g04436 430 PANTHER SOLUTE CARRIER FAMILY 35 124 419 - -
Seca5g04436 430 SUPERFAMILY Multidrug resistance efflux transporter EmrE 303 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04436 Seca-Chr5 101941055 101942347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04436 24 428 Antiporters AT5G17630 68.974 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04436 K15283 - gmx:100101869 723.391