Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04419 ATGTATAATCAACAGGGAGGAGGTCCCTCATGGGCAGTTCCACTAGGAAGAAGGGATAGCTTAACAGCAAACAGAACCCTTGCAAATCAAAACCTTCCAGCACCTTTCTTCACATTGGATCAACTTAAAGCTGCCTTTGCTGTTCAAGGTCTCAACACTCTTGATTTAGTCACACTCTCAGGTGCTCATACATTTGGAAGAGCTCACTGCAGCACATTCAATAATCGATTATACAATTTTAGTGGCACTGGAAATCCTGATCCAACTCTAGACACAAGTTACTTAGAATTATTGCGTGAGATATGCCCTGAGAATGCAACTGAGAACAACCTCACTAATTTGGACCTGACCACACCTGATCAATTTGATAACAATTACTATTCCAATCTTCAGAGCCAGAAGGGGTTACTTCAGAGTGACCAAGAGCTATTCTCAACTCCTGATGCTGATACCATTGACATTGTCAATAGCTTCAGAAGTGACCAAGATCTCTTCTTTGACAACTTTATAGAATCAATGATAAAAATGGGTAACATTGGAGTGATAACAGGGGATGAAGGAGAAATTCGATTACAGTGTAATTTTGTGAATGGGGATGATGGCTCCTCTAGTATTGTTGCATCCAAAGATTCAAAAGATGTAGTGATAATGGCACTTTCAGTTTATAGTGCAGTACTAGCACTTTGGTGTGCAACATTAACAGTCTCAAATGCTGAGTTGAGTACCACGTTTTACAGCGAAACATGTCCATCTCTGAACGATATTGTCTTTGGAAATATCCTCCAGACTTCCCTCTCTGATCCCCGCATCGGTGCGAGCCTCATCAGACTTCATTTTCATGATTGCTTTGTTCAAGGTTGTGATGGATCAGTACTATTGAACAACAGTGCAACCATAGAAAGCGAGCAAGATGCATTGCCAAATATAAACTCATTGAGGCGTTTGGATGTCATCAATAACATCAAGACAGAGGTGGAAGCTGTTTGTCCAGCCACAGTTTCTTGTGCTGATATTCTTGCTATTTCAGCTCAAGTCGCCTCTGCTCTGGGAGGAGGTCCCTCATGGGCAGTTCCACTAGGAAGAAGGGATGGCTTAACAGCAAACAGAACCCTTGCAAATCAAAACCTTCCAGCACCTTTCTTCAATTTGGATCAACTTAAAGCTGCCTTTGCTGCTCAAGGTCTCAACACTCTTGATTTAGTTACACTCTCAGGTGCTCATACATTTGGAAGAGCTCACTGCAGCTTATTCATTAATCGATTATACAATTTCAGTGGCACAGGCAAACCCGATCCAACTCTTGATACAACTTACTTACAAGAATTGCGCAAAATCTGCCCCAATGGTGGATCTGGCACTAACCTTGCCAATTTTGACCCAACCACTCCTGATACACTTGATAAGAACTATTACTCCAATCTTAAAGTTAAAAAGGGCTTGCTTCAAAGTGACCAAGAGTTGTTCTCAACACCCGGTGCAGATACCATTAACATTGTCAACAAGTTCGCTAGTAGTCAAGATGCTTTCTTTGAGAGCTTTAAGGCTTCCATGATTAAAATGGGTAATATTGGTGTCCTAACGGGGAACAAAGGAGAAATCCGAAAACATTGCAATTTTGTTAACAAGAAATCTGTTGAACAAGATCTGGCTCTCGCAACAACAGTCACAATGAGCTCACTTGGTGTCACATTAACAGCTCTATGCTGTGCATTGGTTGTGGTAATTGGAGCACTTCCTTTTCCATCAAACGCACAGCTAGATCCGTCGTTTTACAGGAATACATGTCCGAAGGTGCATTCAATTGTACGCGAAGTCGTAAGGGAAGTTTCAAAGAAAGATCCTCGTATGCTTGCCAGTCTCGTTAGGCTTCACTTCCATGACTGTTTTGTTCAAGGCTGTGATGCATCAGTCTTGCTAAACGACACCTCTACCATCGTGAGTGAGCAAACCGCTTTGCCAAACAACAACTCATTGAGAGGTTTGGATGTTGTGAATCAAATCAAAACAGCTGTGGAAAATGCTTGTCCGAATACAGTTTCTTGTGCTGATATTCTTGCTCTTGCTGCTCAAATATCCTCTGTTCTGGGCTGTGATGGATCAGTCTTGCTAAATGACACTGCTACCATTGTGAGTGAGCAAACAGCTTTGCCAAACAACAACTCATTAAGAGGTTTGGATGTTGTGAATCAGATCAAAACAGCTGTGGAAAATGCTTGTCCTAATACAGTTTCTTGTGCTGATATTCTTGCTCTTGCTGCTGAGATATCCTCTGTTCTGGCTAATGGACCTGATTGGAAAGTTCCATTGGGAAGAAGGGATAGTTTAACAGCAAATCAAACCCTTTCCAATCAAAATCTTCCAGCTCCCTTTTTCAACCTAACTCAACTCATATCCTCATTTGCTGCACAAGGCCTCAATGTTACTGATCTAGTTGCACTCTCAGGTGCTCATACATTTGGCAGAGCTCACTGCAGTACTTTTGTTAATCGATTATACAATTTCAGCAACACTGGAAATCCTGATCCAACTCTCAACACAACTTACTTACAAACACTTCAAGCAATATGCCCCAATGGTGGACCTGGTACCAACCTCACCAATTTGGACCCAACCACTCCTGATACATTTGATTCCAAATACTACTCCAATCTTCAGCTTCAAATGGGCTTGTTTCAGAGTGACCAAGAGCTGTTTTCCACAACCGGTGCAGATACTATTGCCATTGTCAATAGTTTCAGTAGTAACCAAACCCTTTTCTTTGAAAACTTTAAGGCCTCAATGATAAAAATGAGTAAGATTGGAGTGTTAACTGGATCCCAAGGAGAAATTAGAAAGCAATGTAACTTTGTTAATGGGAATTCTGTTGGACTTGCTACTCAAGCCACCAAAGAATCATCAGAAGATGGCATGGTTAGCTCAATCTAA 2925 0.415 MYNQQGGGPSWAVPLGRRDSLTANRTLANQNLPAPFFTLDQLKAAFAVQGLNTLDLVTLSGAHTFGRAHCSTFNNRLYNFSGTGNPDPTLDTSYLELLREICPENATENNLTNLDLTTPDQFDNNYYSNLQSQKGLLQSDQELFSTPDADTIDIVNSFRSDQDLFFDNFIESMIKMGNIGVITGDEGEIRLQCNFVNGDDGSSSIVASKDSKDVVIMALSVYSAVLALWCATLTVSNAELSTTFYSETCPSLNDIVFGNILQTSLSDPRIGASLIRLHFHDCFVQGCDGSVLLNNSATIESEQDALPNINSLRRLDVINNIKTEVEAVCPATVSCADILAISAQVASALGGGPSWAVPLGRRDGLTANRTLANQNLPAPFFNLDQLKAAFAAQGLNTLDLVTLSGAHTFGRAHCSLFINRLYNFSGTGKPDPTLDTTYLQELRKICPNGGSGTNLANFDPTTPDTLDKNYYSNLKVKKGLLQSDQELFSTPGADTINIVNKFASSQDAFFESFKASMIKMGNIGVLTGNKGEIRKHCNFVNKKSVEQDLALATTVTMSSLGVTLTALCCALVVVIGALPFPSNAQLDPSFYRNTCPKVHSIVREVVREVSKKDPRMLASLVRLHFHDCFVQGCDASVLLNDTSTIVSEQTALPNNNSLRGLDVVNQIKTAVENACPNTVSCADILALAAQISSVLGCDGSVLLNDTATIVSEQTALPNNNSLRGLDVVNQIKTAVENACPNTVSCADILALAAEISSVLANGPDWKVPLGRRDSLTANQTLSNQNLPAPFFNLTQLISSFAAQGLNVTDLVALSGAHTFGRAHCSTFVNRLYNFSNTGNPDPTLNTTYLQTLQAICPNGGPGTNLTNLDPTTPDTFDSKYYSNLQLQMGLFQSDQELFSTTGADTIAIVNSFSSNQTLFFENFKASMIKMSKIGVLTGSQGEIRKQCNFVNGNSVGLATQATKESSEDGMVSSI. 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04419 974 Gene3D - 695 951 - -
Seca5g04419 974 FunFam Peroxidase 377 520 - -
Seca5g04419 974 ProSitePatterns Peroxidases active site signature. 271 282 IPR019794 GO:0004601
Seca5g04419 974 PRINTS Haem peroxidase superfamily signature 459 474 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 PRINTS Haem peroxidase superfamily signature 271 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 PRINTS Haem peroxidase superfamily signature 351 363 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 PRINTS Haem peroxidase superfamily signature 399 414 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 PRINTS Haem peroxidase superfamily signature 333 350 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 ProSiteProfiles Plant heme peroxidase family profile. 239 541 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 ProSiteProfiles Plant heme peroxidase family profile. 585 951 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 ProSiteProfiles Plant heme peroxidase family profile. 1 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 CDD secretory_peroxidase 585 950 IPR033905 GO:0004601|GO:0042744
Seca5g04419 974 ProSitePatterns Peroxidases proximal heme-ligand signature. 809 819 IPR019793 -
Seca5g04419 974 SUPERFAMILY Heme-dependent peroxidases 240 541 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 SUPERFAMILY Heme-dependent peroxidases 6 197 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 FunFam Peroxidase 33 176 - -
Seca5g04419 974 Gene3D Peroxidase, domain 2 787 930 - -
Seca5g04419 974 Gene3D Peroxidase, domain 2 33 176 - -
Seca5g04419 974 Gene3D Peroxidase, domain 2 377 520 - -
Seca5g04419 974 PANTHER PEROXIDASE 72-RELATED 235 540 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 CDD secretory_peroxidase 7 196 IPR033905 GO:0004601|GO:0042744
Seca5g04419 974 Pfam Peroxidase 695 914 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 Pfam Peroxidase 7 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 Pfam Peroxidase 266 505 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 Pfam Peroxidase 602 693 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 Gene3D - 586 694 - -
Seca5g04419 974 Gene3D - 244 541 - -
Seca5g04419 974 ProSitePatterns Peroxidases proximal heme-ligand signature. 399 409 IPR019793 -
Seca5g04419 974 FunFam Peroxidase 243 386 - -
Seca5g04419 974 CDD secretory_peroxidase 239 540 IPR033905 GO:0004601|GO:0042744
Seca5g04419 974 PRINTS Plant peroxidase signature 398 410 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 PRINTS Plant peroxidase signature 473 490 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 PRINTS Plant peroxidase signature 273 293 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 PRINTS Plant peroxidase signature 249 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 PRINTS Plant peroxidase signature 332 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 PRINTS Plant peroxidase signature 351 366 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 PRINTS Plant peroxidase signature 313 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 PRINTS Plant peroxidase signature 457 472 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 PRINTS Plant peroxidase signature 515 528 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 FunFam Peroxidase 787 930 - -
Seca5g04419 974 SUPERFAMILY Heme-dependent peroxidases 694 951 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g04419 974 SUPERFAMILY Heme-dependent peroxidases 585 694 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04419 Seca-Chr5 101741515 101772861 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04419 682 974 Peroxidase AT2G38380 53.061 1.87e-95 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04419 K00430 - gsj:114367725 723.776