Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04418 ATGAGAAAGAAAGAAAGAAAGATGAATTTATCCTCCGTTGGTGTAGTCTCTGCTGTGGTAATTGTGGTAATTGGAGCACTATTGCCTCTCTCTTCAGATGCACAGTTAGATCCGTCATTCTACAATGATACTTGTTCCGATCTCCATTCAATCGTACGTGGCGTCCTCACTAATGTCTCTCAATCTGATCCCCGAATGCTTGCCAGTCTCATCAGGCTCCACTTCCATGACTGTTTCGTTCAAGGCTGTGATGGATCAATTCTGTTGAACAACACTGCAACGATAGCGAGTGAGCAAGATGCAGCGCCAAATAACAACTCCATTAGAGGTTTGGATGTTGTCAATCAGATCAAAACGGCTGTGGAAAATGCTTGTCCTAATACAGTTTCTTGTGCGGATATACTTGCACTTGCTGCTCAAATATCTTCTGATCTGGCTAGTGGTCCTGTTTGGGAAGTTGTATTGGGAAGAAGGGATAGTTTAACAGCAAATCAAACCCTTGCTGCTCAAAATCTTCCAGCCCCCACTTTCAATCTCACTCAACTTAAATCCTCATTTTCTGCTCAAGGTCTCAATACTACTGATCTAGTTGCACTCTCAGGTGCTCACACAATTGGTAGAGGCCAATGCCGCTTTTTTGATAATCGATTATACGATTTCAACAACACTAGCAGTCCTGATCCAACTCTCAACACAACCTATTTACAAACACTTCAAGCAATATGTCCCAATGGAGGACCTGGTACCAACCTCACGAATTTGGACCCAATCACTCCTGATACATTTGACTCCAAATACTACTCTGATCTTCAGCTTCAAATGGGCTTGTTTCAGAGTGACCAAGAGCTGTTTTCCACAACTGGTGCAGATACTATTGCCATTGTCAATAGTTTCAGTAGTAACCAAACTCTTTTCTTTGAAAACTTTATAGCTTCAATGATTAAAATGGGTAATATTGGAGTGTTAACAGGATCTCAAGGTGAAATCCGTACACAATTAGCCACAGCTGTGTGCTGTGTAGTGGTTGTGCTTGGAGGGTTACCTTTCTCCTCAGATGCACAATTAGATCCCTCATTTTATAAGAAAACATGTCCACAGCTGCATTCTATTGTTCATAAACTCGTATGGAAAGCTTCATTATCTGATCCCCGAATCTTTGCCAGTCTCGTCAGGCTTCACTTTCATGATTGTTTTGTTCTAGGCTGTGATGCATCGATTTTGTTGAACAACACCGCTACCATTGTGAGTGAACAACAAGCTTTGCCAAATAACAACTCAATAATAGGTTTGGATGTTGTGAATAATATCAAGACAGCAGTGGAAAAAGCTTGCCCTGGCATAGTTTCCTGTGCTGATATTCTTGCCCTGGCTGCTGAAGCATCTTCTGCTCTGGCTTTCGGTCCTTGTTGGAAAGTTCCTTTGGGAAGAAGGGATGGTTTAACAGCCAACAGGACCCTTGCTAATATAAATCTTCCAGCTCCTTTCTTCACTCTTGATCAACTTAAAAAAGCTTTTTCGGATCAAGGCCTTGACACTACTGATCTAGTTGCACTCTCAGGTGCTCATACATTTGGCAGGGCTCACTGCTCTTTATTCCAAGATCGATTGTACAACTTCAACAACACTGGCAAACCCGATCCAACTCTTGATACAACTTACTTACAAACATTAAGCAAAATCTGCCCCAATGGTGGACCTGGCACTAATCTCGCCAATTTTGACCCAACCACTCCTGATAAACTTGATAAGAACTACTACTCCAATCTTAAAGTTAAAAAGGGCTTGCTTCAAAGTGACCAAGAGTTGTTCTCAACACCCGGTGCAGATACCATTAGCATTGTCAACAAGTTCGCTAGTAGTCAAGATGCTTTCTTTGAGAGCTTTAAGGCTTCCATGATTAAAATGGGTAATATTGGTGTCCTAACGGGGAAGAAAGGAGAAATTCGAAAACAGTGTAATTTTATTAACAAAAAATCTACTGAACAAGATGAGGGTGGGTTTAGCTCAATCTAA 2013 0.4148 MRKKERKMNLSSVGVVSAVVIVVIGALLPLSSDAQLDPSFYNDTCSDLHSIVRGVLTNVSQSDPRMLASLIRLHFHDCFVQGCDGSILLNNTATIASEQDAAPNNNSIRGLDVVNQIKTAVENACPNTVSCADILALAAQISSDLASGPVWEVVLGRRDSLTANQTLAAQNLPAPTFNLTQLKSSFSAQGLNTTDLVALSGAHTIGRGQCRFFDNRLYDFNNTSSPDPTLNTTYLQTLQAICPNGGPGTNLTNLDPITPDTFDSKYYSDLQLQMGLFQSDQELFSTTGADTIAIVNSFSSNQTLFFENFIASMIKMGNIGVLTGSQGEIRTQLATAVCCVVVVLGGLPFSSDAQLDPSFYKKTCPQLHSIVHKLVWKASLSDPRIFASLVRLHFHDCFVLGCDASILLNNTATIVSEQQALPNNNSIIGLDVVNNIKTAVEKACPGIVSCADILALAAEASSALAFGPCWKVPLGRRDGLTANRTLANINLPAPFFTLDQLKKAFSDQGLDTTDLVALSGAHTFGRAHCSLFQDRLYNFNNTGKPDPTLDTTYLQTLSKICPNGGPGTNLANFDPTTPDKLDKNYYSNLKVKKGLLQSDQELFSTPGADTISIVNKFASSQDAFFESFKASMIKMGNIGVLTGKKGEIRKQCNFINKKSTEQDEGGFSSI. 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04418 670 FunFam Peroxidase 39 185 - -
Seca5g04418 670 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04418 670 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04418 670 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04418 670 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04418 670 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04418 670 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04418 670 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04418 670 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04418 670 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04418 670 FunFam Peroxidase 492 635 - -
Seca5g04418 670 SUPERFAMILY Heme-dependent peroxidases 354 656 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g04418 670 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04418 670 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04418 670 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04418 670 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04418 670 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04418 670 FunFam Peroxidase 173 316 - -
Seca5g04418 670 PANTHER PEROXIDASE 72-RELATED 352 654 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04418 670 ProSiteProfiles Plant heme peroxidase family profile. 354 656 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04418 670 Pfam Peroxidase 375 620 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04418 670 Pfam Peroxidase 54 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04418 670 Gene3D - 40 332 - -
Seca5g04418 670 FunFam Peroxidase 358 502 - -
Seca5g04418 670 CDD secretory_peroxidase 35 332 IPR033905 GO:0004601|GO:0042744
Seca5g04418 670 Gene3D - 359 656 - -
Seca5g04418 670 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Seca5g04418 670 ProSitePatterns Peroxidases proximal heme-ligand signature. 514 524 IPR019793 -
Seca5g04418 670 ProSiteProfiles Plant heme peroxidase family profile. 35 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04418 670 CDD secretory_peroxidase 354 655 IPR033905 GO:0004601|GO:0042744
Seca5g04418 670 SUPERFAMILY Heme-dependent peroxidases 35 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g04418 670 Gene3D Peroxidase, domain 2 492 635 - -
Seca5g04418 670 Gene3D Peroxidase, domain 2 173 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04418 Seca-Chr5 101721150 101731874 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04418 337 665 Peroxidase AT5G06730 55.015 6.46e-126 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04418 - K00430 gsj:114367725 942.954