Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04410 ATGGCCATAACGCAACGAGCACAATACTTGTTTGGTAGTAATGAATACTATGTCCGAGTGACCAATGGGTTCACAGACAATTCATCTGTGCCTTTGGTGATTTGGTGCTCATCAGAGGAAATGGATCTTGGAGGGCGTGCTTTGCAAGAGCATGATGACTTTAGTTGGACCATGAGGCCCAATTTGTGGAGCAGCAACCAAATGAAGTGCACCATGAAATGGGACAACACAAGGAAGAGTTTTGATGCATTCAAGGCCTCTAGGGATGCCAATCGATGTGGCCCTCATAGGATATGTTATTGGAGGGTCACACAAGATGGCTTTTATTTCAGCAACGATGATGTCAATTGGAGGAAGGACTTCTTATGGTGA 372 0.4489 MAITQRAQYLFGSNEYYVRVTNGFTDNSSVPLVIWCSSEEMDLGGRALQEHDDFSWTMRPNLWSSNQMKCTMKWDNTRKSFDAFKASRDANRCGPHRICYWRVTQDGFYFSNDDVNWRKDFLW. 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04410 123 Pfam Plant self-incompatibility protein S1 18 123 IPR010264 -
Seca5g04410 123 PANTHER - 15 117 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04410 Seca-Chr5 101625919 101626290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04410 30 107 Carbohydrate Esterase AT3G16970 31.707 1.90e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04410 - - gmx:100792052 233.802