Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04401 ATGATGTATGCCATTCCCTGTTACATGCAGTTTATGTTATTGGTTATGAAAGCTTACCATTATATTATATCAGAACACGAGGTCTATCTCCATACTGCTCCATTATGCCATATTGGGGGCTTGTCATCAGCCATGACCATGCTTATGGTTGGAGGTTGCCATGTATTGATGCCAAAGTTTGATGCAAAATCAACTGTAGCTGCCATAGAGCAATATAACGTGACCTCTTTTATCACTGTTCCTGCAATAATGGCCAGTCTGATTTCTGTAGTTAGGCACAAAAAAACCTGGAAAGGGGGAGAAACTGTCAAGAAAATACTTAATGGGGGTGGAAGCCTCTCACTTGAGCTCATCAAAGACACTGGCATATTCTTCCATAAAGCTAAGCTTATTTCAGCTTATGGGATGACAGAGGCATGCTCTTCATTGACATTCCTGACACTATATGACCCAATACACAAAACCACTAGTCAGCCCCTTCAAAAATATGGTGAGGCAGGATCCAATCTAATTCATCAGCCACAAGGTGTTTGTGTTGGCAAGGCTGCACCCCATGTAGAATTGAAAATATGTGCAGATGCCACTTGTCACAGTGGGAGAATTTTAACTAGAGGACCACATTTAATGCTCAAGTATTGGGATCAAATCCTCACAACCCCACTAAATCAGAGGAATGAAGTATGGCTTGACACAGGGGACATTGGATCAATTGATTCATATGGTAATTTGTGGCTCCTTGGAAGAACAAACGGTCGTATCAAGAGTGGTGGAGAGAACATTTACCCTGAAGAGGTAATAAAAGTGACACTAAAAACTTTTTGGTGTTTGCTTGATCCAGGAGTGCATCATTTCTTCTTTCTTTTGCACATTGAGTTCTTGTCTTTACTTGGTTTATGA 897 0.408 MMYAIPCYMQFMLLVMKAYHYIISEHEVYLHTAPLCHIGGLSSAMTMLMVGGCHVLMPKFDAKSTVAAIEQYNVTSFITVPAIMASLISVVRHKKTWKGGETVKKILNGGGSLSLELIKDTGIFFHKAKLISAYGMTEACSSLTFLTLYDPIHKTTSQPLQKYGEAGSNLIHQPQGVCVGKAAPHVELKICADATCHSGRILTRGPHLMLKYWDQILTTPLNQRNEVWLDTGDIGSIDSYGNLWLLGRTNGRIKSGGENIYPEEVIKVTLKTFWCLLDPGVHHFFFLLHIEFLSLLGL. 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04401 298 SUPERFAMILY Acetyl-CoA synthetase-like 17 265 - -
Seca5g04401 298 CDD AFD_class_I 10 265 - -
Seca5g04401 298 Pfam AMP-binding enzyme 18 255 IPR000873 -
Seca5g04401 298 Gene3D - 8 250 IPR042099 -
Seca5g04401 298 PANTHER ACYL-COA SYNTHETASE 18 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04401 Seca-Chr5 101526811 101533246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04401 11 281 Monolignol Biosynthesis Gene Families AT4G19010 28.975 1.67e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04401 K14760 - gmx:100787691 422.165