Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g04347 | ATGTGCAGCATCTTTGTCCCAGTCATGGACAATTACCAAGGCGATTTAACTGACATACTTCGTGCTAGTGGTGGAGCATACGGCACCACCTGCAGCACAGGAACTACTCCATCATCTCCTCAACCACCACCTCATAATCCTCTCTCTCATCACTGGCAGCAGCAGCACCAACAACAACAGTTCTCTTCTGATCCTTTGAGTTTCTCTAATTCTGTTCTGGAAGATCCTAGAGGAGGAGGAGGAGGCACCTACTTTGGTGATCCATTCTCAACCATGAGAGATCCCTTCTTACAAGAGCTTGATATGCCTCCTTCTTCTAATTCCTACTTCAACTCCTCTGCAGGGGGCTTGGAACAAGCAACAGTACCTGCTACTGCTACTGCTACTTTTGGTGTTAGTGTTAGTGATCATAATATTAATACTAGTTCCTCTTCTTCTTGTTCTACTTCTTCTACTTGTGTTTTTGCACACAAGGTTGTTGAAGATGAGATGATGAGAAGGCCTTGTAAGAACATATTCTCAAACATGATTCAGATCTCTCCCAATGCAAACTTACCAGCTTATCATGATTCACCTTCCCCGAGAGCAATTAAGCCTTCTCTTGTGGTTTCACCAAACATGATTAATGCTAATACCTCCAAGGATTGTCTTATGGACAACACACAAGTTCAGATCTCATCTCCACGGAATCCGGCTCTTAAGCGAAGGAAGAACCAGGCGAAAAAGGTGGTTTGTATCCCTGCACCAGCAGCTGCAAACAGCAGACAAACTGGAGAGGTAGTTCCTTCAGATTTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGTTCACCTTATCCCAGGGGTTATTATAGATGCAGCAGCTCAAAGGGTTGTTCTGCAAGGAAGCAAGTTGAGAGGAGCAGAACAGATCCAAACATGTTGGTTATTACTTACACTTCAGAGCATAACCATCCATGGCCAACTCAGAGAAATGCTCTGGCTGGTTCAACAAGATCCCAACCATCCAAGAACAATGCTGCCTCTGGTTCTTCCAAGAATACTTCAGAAGCCTCTCAAAAGGGGACAACAAAGCCAAAGGAAGAGCAGCAAGAGAGCAATAGTGAAGGAAATAACTCCCCAGTTGTTGCAGCTGGGAACTCAGGAAACAGTGTGAAGGAAGAGATGGAAGATATAGAGAAGCAGCTTGAGATGGAGGATGGAGAATTCAGTGATGGACTTCCTTATAAGCCATCTTTGATGGAGAGTAACCAGTCATCAGAGGATTTCTTTGCAGAATTGGGAGAAATAGAAGCTGATCCATTGAACCTTTTGTTTAGTCAAGGTTTTGGTGATCAAAGGGATCAATCCAAGGCATTAGATCCATTCCATCTGTTTGACTGGTCAGGAGATAATCACAACAATACCAACTCATTGGAAGAACCTAATAAGAGAAGGTTATAA | 1449 | 0.4362 | MCSIFVPVMDNYQGDLTDILRASGGAYGTTCSTGTTPSSPQPPPHNPLSHHWQQQHQQQQFSSDPLSFSNSVLEDPRGGGGGTYFGDPFSTMRDPFLQELDMPPSSNSYFNSSAGGLEQATVPATATATFGVSVSDHNINTSSSSSCSTSSTCVFAHKVVEDEMMRRPCKNIFSNMIQISPNANLPAYHDSPSPRAIKPSLVVSPNMINANTSKDCLMDNTQVQISSPRNPALKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNAASGSSKNTSEASQKGTTKPKEEQQESNSEGNNSPVVAAGNSGNSVKEEMEDIEKQLEMEDGEFSDGLPYKPSLMESNQSSEDFFAELGEIEADPLNLLFSQGFGDQRDQSKALDPFHLFDWSGDNHNNTNSLEEPNKRRL. | 483 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g04347 | 482 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 129 | 441 | IPR044810 | GO:0003700 | |
Seca5g04347 | 482 | MobiDBLite | consensus disorder prediction | 287 | 422 | - | - | |
Seca5g04347 | 482 | MobiDBLite | consensus disorder prediction | 306 | 356 | - | - | |
Seca5g04347 | 482 | Gene3D | WRKY domain | 236 | 316 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Seca5g04347 | 482 | MobiDBLite | consensus disorder prediction | 30 | 88 | - | - | |
Seca5g04347 | 482 | SMART | WRKY_cls | 262 | 322 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca5g04347 | 482 | MobiDBLite | consensus disorder prediction | 368 | 382 | - | - | |
Seca5g04347 | 482 | SUPERFAMILY | WRKY DNA-binding domain | 260 | 323 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Seca5g04347 | 482 | ProSiteProfiles | WRKY domain profile. | 257 | 323 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca5g04347 | 482 | MobiDBLite | consensus disorder prediction | 461 | 482 | - | - | |
Seca5g04347 | 482 | FunFam | probable WRKY transcription factor 14 | 236 | 316 | - | - | |
Seca5g04347 | 482 | MobiDBLite | consensus disorder prediction | 48 | 70 | - | - | |
Seca5g04347 | 482 | Pfam | WRKY DNA -binding domain | 264 | 321 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g04347 | Seca-Chr5 | 100916327 | 100919265 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g04347 | 1 | 482 | WRKY Transcription Factor Family | AT1G30650 | 40.945 | 6.52e-95 | 292 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Seca5g04347 | WRKY | 2.7e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g04347 | - | - | aprc:113852911 | 613.224 |