Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g04327 | ATGGAAGTGAAAGGAAGTGTAAGCAATTCCAACACCACCAACACCATGATCCAAAGCGAGGATGATATGGACCTCCGAAGAGGCCCATGGACCGTCGATGAGGATCTTGCCCTTATCAATTACATTGCCAATCACGGTGAAGGTCGCTGGAACTCCCTTGCCCGTTCTGCTGGACTCAAACGAACTGGCAAGAGCTGCAGATTGAGATGGTTGAATTATCTCCGTCCAGATGTTCGACGTGGCAACATCACACTCGAAGAACAGCTTCTTATTCTTGAACTCCATACTCGCTGGGGAAACCGATGGTCCAAAATTGCTCAATATTTACCCGGAAGAACTGATAATGAGATTAAGAATTATTGGAGAACTCGTGTCCAAAAGCATGCCAAACAACTCAAATGTGACGTGAATAGCAAGCAATTTAAGGATGCCATGCGCTACCTCTGGATGCCAAGGCTGGTGGAGCGCATTCAAGCCGCCGCAGCCGCCACGGCCACCGCCACCAATGGTTCTCCAACCTTATCTCCTAGTGCCACCACAACCGTCACCACAAACAATACCACATACAATTACAACAACAACAACAATTTTGAGGTTCAAAGTGGGAACATGGTGTTACCTCCGGCAATTATGAACAACAACTTTGGCGGTTCAAATGTTACACAAAGTTATACTCCTGAGAATAGTAGCAGTGGCACAGTGGCATCATCAGACTCATTTGGGACACAAGTCTCACCTGTCTCGGACTTGACTCAAGATTATTACAATGTTGTTGTTGGTAATAACAACAACCCTAATCCTGATTACTATCAACAAGCACATCAACTTGGGTTCTTAGATTGCATCACTAGCCCCTCTGGGTTGTTCTCTCAGGAGATGGATTTCCAATCCATGGAACCAAACACCCAATGGATGCAGAGTGGGGACAATTCCGACAATTTCTGGAATGTTGAAAACATGTTGCTCTTTCAACAACTCAGTGACAACATGTGA | 993 | 0.4562 | MEVKGSVSNSNTTNTMIQSEDDMDLRRGPWTVDEDLALINYIANHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHTRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDAMRYLWMPRLVERIQAAAAATATATNGSPTLSPSATTTVTTNNTTYNYNNNNNFEVQSGNMVLPPAIMNNNFGGSNVTQSYTPENSSSGTVASSDSFGTQVSPVSDLTQDYYNVVVGNNNNPNPDYYQQAHQLGFLDCITSPSGLFSQEMDFQSMEPNTQWMQSGDNSDNFWNVENMLLFQQLSDNM. | 331 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g04327 | 330 | ProSiteProfiles | Myb-like domain profile. | 22 | 74 | IPR001005 | - | |
Seca5g04327 | 330 | FunFam | Myb transcription factor | 27 | 79 | - | - | |
Seca5g04327 | 330 | Gene3D | - | 84 | 147 | - | - | |
Seca5g04327 | 330 | MobiDBLite | consensus disorder prediction | 166 | 187 | - | - | |
Seca5g04327 | 330 | Gene3D | - | 24 | 80 | - | - | |
Seca5g04327 | 330 | ProSiteProfiles | Myb-like domain profile. | 75 | 125 | IPR001005 | - | |
Seca5g04327 | 330 | FunFam | MYB transcription factor | 84 | 147 | - | - | |
Seca5g04327 | 330 | Pfam | Myb-like DNA-binding domain | 80 | 123 | IPR001005 | - | |
Seca5g04327 | 330 | Pfam | Myb-like DNA-binding domain | 27 | 74 | IPR001005 | - | |
Seca5g04327 | 330 | SMART | sant | 26 | 76 | IPR001005 | - | |
Seca5g04327 | 330 | SMART | sant | 79 | 127 | IPR001005 | - | |
Seca5g04327 | 330 | PANTHER | MYB TRANSCRIPTION FACTOR-RELATED-RELATED | 22 | 199 | IPR044676 | GO:0003700|GO:0006355|GO:0043565 | |
Seca5g04327 | 330 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 22 | 78 | IPR017930 | - | |
Seca5g04327 | 330 | CDD | SANT | 100 | 123 | IPR001005 | - | |
Seca5g04327 | 330 | SUPERFAMILY | Homeodomain-like | 24 | 121 | IPR009057 | - | |
Seca5g04327 | 330 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 79 | 129 | IPR017930 | - | |
Seca5g04327 | 330 | MobiDBLite | consensus disorder prediction | 223 | 244 | - | - | |
Seca5g04327 | 330 | CDD | SANT | 29 | 74 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g04327 | Seca-Chr5 | 100660599 | 100662895 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g04327 | 20 | 317 | MYB Transcription Factor Family | AT3G06490 | 53.797 | 4.52e-89 | 268 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Seca5g04327 | Myb_DNA-binding | 4.6e-15 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g04327 | K09422 | - | gmx:100305347 | 492.271 |