Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04233 ATGGCCATGGCCTCGCACGTGCATACTTGTTGCTGCTTCTTCTTCTTCACCGTCGCCGTCTTATCCATCTTCGCCGCAGCGCCGTCGATGTCTCAGCCGCAAACCGCCGATTCCTGCAACGGAATATTCCTCTCCTACGCCTACACCGGCGGCGGGCGGCTGCCGCCGAACATATCCGACCCGGCGCAGCAACCGTACCGGTTCGAGTCGAGGCTGACAGTTCTCAACAACGGACTGGAGGAGCTAAAGTCTTGGAGAGTGTTCGTGGGATTTCAGCACAACGAGTGGTTAGTGTCTGCGTCCAACGCCGTGCTCGCCGACGGCACGAGCATCCCCGGTGCCGTCGGAAACGGAACCGTTTTCGCTGGTTCCACCGTGACCGATCTCAAGACTGCAGCGGCAACTGCAGGGGATCTGAGTCAGATGCAGGTTCGGGTGGAACTGTTAGGGACCCTGTTTGGAGTGGCGCCTCCCAACGTGCCATTGCCTTCCAACATAAGCCTCGCTAACGATGGTTTCGTGTGTGGTCAACCCACTCGTCAAGGGAACAATGAGACTCATGTCTGTTGTACAAGTGATCCCAATTTCAAAACAAACTTCGCCAGTGATGAAGAGTTCCTGCCACGTCAGAATGGTGATCTTACCATTATGTATGATGTGATCAAAGCTTATGATTCTAATTATTGGGCAGAGGTTACAATGGCAAACCACAACCCTCTTGGTCGTCTTGATAACTGGAGGTTAAGTTGGGACTGGGACAATGATGAGTTTATACATACAATGAAAGGTGCTTATCCATCTGTTGTGGATTCTTCTGACTGTGTATTTGGTTCCCAAGGTACATTCTACAAGGAACTTGATTTTTCCAATGTATTGAATTGTGAAAAAAGGCCAACCATCATTGATCTCCCTCCCACAAGGTTCAATGATTCAGTCCTTGGCAAAATCCCATTTTGCTGCCGGAATGGTACTATATTGCCACCATCAATGGACCCCAGCAAGTCTGTTTCAAGGTTCCAATTACAGGTTTTCAAAATGCCACCAAACCTTAACCGTTCCCACCTTATACCACCACATAACTGGGAGATAAGAGGTGCTACACTCAACCCTGATTACCAATGTGGCACCCCAATCCGGGTTAGTCCCTCTGAATCACCTGACCAAACAGGCTTACCATCAAACATATCTGCAATTGCTAGTTGGCAGGTTGTATGCAACATAACAAAGGCAAAAAGTGAATCACCTAAATGTTGTGTCTCGTTTTCAGCCTATTACAATGAATCAGTTATTCCTTGCAACACATGTGCATGTGGATGCCCCAGGAATCCAGAGAGAACATGTAGTGCTGCTGCACCAGCTATGTGGCTTCCACCAGAGGCACTTCTTGTTCCTTTTGAGAATCGAAGTAAAATGGCTGTTGATTGGGCTAGTCTGAAACATCTTCAAGTGCCTAACCCAATGCCTTGTGGTGACAATTGTGGTGTAAGCATAAACTGGCATGTTTATACAGATTACCGTAAAGGTTGGACAGCAAGGATCACAATTTTTAACTGGGGTGAGACAGAGTTTGCAGACTGGTTTGCTGCAGTGCAATTGGACAAAGCTGCAGAAGGTTTTGAGGAAATGTATTCATTCAATGCAAGCACCTTAGGCAGTATAAACAATACAATATTCATGCAAGGTAATCCAGGATTGAATTTTCTTGTAGCAGAAAAAAATGGATCTAACCCTCGGAGAGATCCTAGGGTGCCTGGGAAACAACAATCAGTAATCTCCTTCACCAAAAAAGTTACTCCTGGAATCAATGTGGCTGGTGGTGATGGGTTTCCCAGTAAAGTGTTCTTCAATGGGGAGGAATGCTCTCTTCCTTCAGTGCATCCAAGCAGTGGTTTGAGGAAAGAGTTTTCCTTGGCTACTACAGCATTCCTAATACTGTTGTCAATCATCTTGATGTGGCAATAG 1962 0.4704 MAMASHVHTCCCFFFFTVAVLSIFAAAPSMSQPQTADSCNGIFLSYAYTGGGRLPPNISDPAQQPYRFESRLTVLNNGLEELKSWRVFVGFQHNEWLVSASNAVLADGTSIPGAVGNGTVFAGSTVTDLKTAAATAGDLSQMQVRVELLGTLFGVAPPNVPLPSNISLANDGFVCGQPTRQGNNETHVCCTSDPNFKTNFASDEEFLPRQNGDLTIMYDVIKAYDSNYWAEVTMANHNPLGRLDNWRLSWDWDNDEFIHTMKGAYPSVVDSSDCVFGSQGTFYKELDFSNVLNCEKRPTIIDLPPTRFNDSVLGKIPFCCRNGTILPPSMDPSKSVSRFQLQVFKMPPNLNRSHLIPPHNWEIRGATLNPDYQCGTPIRVSPSESPDQTGLPSNISAIASWQVVCNITKAKSESPKCCVSFSAYYNESVIPCNTCACGCPRNPERTCSAAAPAMWLPPEALLVPFENRSKMAVDWASLKHLQVPNPMPCGDNCGVSINWHVYTDYRKGWTARITIFNWGETEFADWFAAVQLDKAAEGFEEMYSFNASTLGSINNTIFMQGNPGLNFLVAEKNGSNPRRDPRVPGKQQSVISFTKKVTPGINVAGGDGFPSKVFFNGEECSLPSVHPSSGLRKEFSLATTAFLILLSIILMWQ. 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04233 653 PANTHER COBRA-LIKE PROTEIN 7 26 650 - -
Seca5g04233 653 Pfam COBRA-like protein 228 408 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04233 Seca-Chr5 99788693 99791238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04233 39 637 COBRA Gene Family AT4G16120 68.212 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04233 - - vum:124836920 1063.52