Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04217 ATGGTTCTTTTTCCATCTTTTGTCAATGGATTGGCAAGAACTGTGTCGTTGAAGAAAGAGAAGAGCTGTGGAAAGGATGATGGAAGAAAAACTGTGGAAGCATTGGCTAAGGAAGCAAGGAAGAATGAATTGTTATTGAGTTCATCTGGAATTGTTAAGTCTTCCAAGGCCAACAATTTTACCTGTTTGTTCACTAAGCAGGGCCAGAAAGGAGTCAATCAGGACTGCCTTATTGTTTGGGAGGAATTTGGTTGCCAAGAAGACATAATCTTCTGTGGAGTTTTTGATGGACATGGCCCTTGGGGACACTTTGTAGCCAGAAGGGTCAGGAAACTACTACCTGCTTCTTTGCTATGCAATTGGCAGAAAAATCTGGCTGCAACATCACTTGAGCTTGATTTTAAGATGGAAGCAGATAGGAACCTCCATAGATTTGAAATATGGAAGCAGTCCTACATAAGGACATGTGCTGCAGTTGATCAGGATCTCAAGCAACATACTAGGATTGATTCCTTTCAAAGCGGTACTACAGCTTTGACAATTATCAAACAGGGTGAACATCTCATTATAGCAAACGTTGGTGATTCTAGGGCTGTCTTGGCAACCACTTCAGAGGATGGCACATTGACTCCTCTTCAGCTTACCACTGACTTTAAGCCAAATTTACCAAATGAGGCAGAGCGTATAACTCAATCCAGAGGGAGGGTATTTTGTTTGGAAGATGAACCAGGAGTGTGCAGGGTCTGGATGCCAAATGGTAAGACCCCGGGACTAGCAATATCTAGAGCATTTGGTGATTACTGTGTAAAAGATTTTGGACTAATCTCTGTGCCAGACGTGACACAAAGAAAACTTACCACCAAGGATCAATTTGTCATCTTGGCAACAGATGGGGTATGGGATGTTATTTCTAACCAAGAAGCAGTGAAAATTGTTGCTTCAACGCCTCATAGAGAAAAAGCAGCTCAAAGACTTGTGAAATGCGCCATACATGAATGGAAATGTAAGAGAAGAGGCATTGCTATTGATGATGTATCAGCTGTTTGCCTCTTCTTTCACTCTCCCCCCTCTCACCAATTCCCTACCACTAAAGATCGAGCAGCAGCAGCTGCTATGAACATCACCACCACGTCCACTTCCTTAACCTCACAACTCTCACTCCCTCCCCGACTCGCCTCTTGCGCGTCCCGTCAACGCGCCACCCTCTCTCTCCCCTCAACTCATTATCCTTTTCTTTCTCTCTCCAAAACCAGACGACGCTTTCCCTCCGCCATGTCCTCTCCGACCTCCTTCACCGAACTCAGCGACGAATCACACTTCGAATCTCTTCTCTCACCCGACGGTTACATCTCCATCTGCGGCTTTGGCTCTCTCCTCTCCGAGCGAAGCGCTCGAAGCACTTTTCCCGATTTGCTCAATTTCAGAATTGCCAGGTTGAACCACTTTCGTCGCGTCTTCGCTCATGTCGCTCCCGTTTTCTTCGAGCGCGGCATTGCCAAACCAGAAACTATGGAAATTTCCAGCTTGAGTGTGGAGCCATGTGAAGGAGAAACTCTTGTAGTAACTGTCTTTGAGATCAGAAAATCGGAGATTCCGGATTTTATCAAGAGGGAGGTTGAGTTTCGGTTTCTTGCTGTTCTTCCTGAAACACTTGATGGCAAGCATTTTGATTTCCCAGCGGTCCTTTGTGCCCGTTATAGTGATGAGGAATTCTTCAACATTAGATGTAAAGGAAACAAGGAAATCTATTTTCAGCAATATGGACGATGGAATATTGATAAAATTTGGAGAGATGATGTTTTACCTTGCCGTGTTTATCTTCGACACTGTGTATTGGCAGCAAAGAATCTCGGTGACACAGCCTACAACAACTTCCTAGATCACACTTACCTTGCTGACCGTAAAACAACCATTCGTGAGTACTTGGAGACAACAGGTTCTAGCATTATGGAAGAGGAGCCCCCTGAATCCCTCAAGTACCGCTATGGTGGTTGA 1995 0.4486 MVLFPSFVNGLARTVSLKKEKSCGKDDGRKTVEALAKEARKNELLLSSSGIVKSSKANNFTCLFTKQGQKGVNQDCLIVWEEFGCQEDIIFCGVFDGHGPWGHFVARRVRKLLPASLLCNWQKNLAATSLELDFKMEADRNLHRFEIWKQSYIRTCAAVDQDLKQHTRIDSFQSGTTALTIIKQGEHLIIANVGDSRAVLATTSEDGTLTPLQLTTDFKPNLPNEAERITQSRGRVFCLEDEPGVCRVWMPNGKTPGLAISRAFGDYCVKDFGLISVPDVTQRKLTTKDQFVILATDGVWDVISNQEAVKIVASTPHREKAAQRLVKCAIHEWKCKRRGIAIDDVSAVCLFFHSPPSHQFPTTKDRAAAAAMNITTTSTSLTSQLSLPPRLASCASRQRATLSLPSTHYPFLSLSKTRRRFPSAMSSPTSFTELSDESHFESLLSPDGYISICGFGSLLSERSARSTFPDLLNFRIARLNHFRRVFAHVAPVFFERGIAKPETMEISSLSVEPCEGETLVVTVFEIRKSEIPDFIKREVEFRFLAVLPETLDGKHFDFPAVLCARYSDEEFFNIRCKGNKEIYFQQYGRWNIDKIWRDDVLPCRVYLRHCVLAAKNLGDTAYNNFLDHTYLADRKTTIREYLETTGSSIMEEEPPESLKYRYGG. 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04217 664 PANTHER OS05G0358400 PROTEIN 414 664 - -
Seca5g04217 664 Pfam Protein phosphatase 2C 81 330 IPR001932 -
Seca5g04217 664 Gene3D - 48 354 IPR036457 -
Seca5g04217 664 SMART PP2C_4 51 350 IPR001932 -
Seca5g04217 664 FunFam Probable protein phosphatase 2C 34 51 354 - -
Seca5g04217 664 SUPERFAMILY PP2C-like 56 355 IPR036457 -
Seca5g04217 664 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Seca5g04217 664 CDD PP2Cc 62 352 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04217 Seca-Chr5 99652433 99661688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04217 1 353 PP2C-type Phosphatase Gene Family AT3G05640 60.282 4.05e-163 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04217 - - gmx:100814087 632.869