Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g04124 | ATGAGATTTTTAACACTTGCAATTGTTCTCCTCTTGTGCTATTCTTGTGGGATATTAGTCTTTTGCCATGGAAGCTTAGATAGTCATGAGAGCACTTTGAGAGTGCTTTTGGAGGTGAAATCATCTTTCTTGGGAGACCCTCAAAATGTTCTGAGTGATTGGTCAGAGAACAATACTGATTACTGCAGCTGGAAAGGAGTGTCATGTGAGTTGAAGAAGTTAAACTCCAAAAATTTGAATGACTCGGTGCGAGTGGTGGTGGGACTCAACCTGGCTGACTCGTCACTCACTGGGTCAATATCACCCTCACTCGGTCGTTTGCAAAACCTGCTCCGTCTTGATCTCTCTTCTAACTACCTCACCGGTCCCATTCCACCTAGCATCTCCAACCTCATTTCGTTGGAATCTCTGCTACTCTTCTCCAACCAACTCACGGGTCACATTCCCACTGAGTTTGGTTCGCTGCTGAGTCTCCGAGTTTTGCGAATCGGTGACAATGGACTCACTGGTGTGATTCCCGCTTCACTTGGGAATGTGGTTAACCTTGTCAACCTTGGTTTAGCTTCATGCAGTCTCACCGGTTCGATTCCACCCCAACTCGGTCAACTCAGTGAGTTGGAGAATCTCAACCTGCAGGACAATGAATTGAAGGGTCCGATTCCGTCCGAGTTAGGGAACTGCTCAAGCCTTGTCAACTTCACTGCTGCTGATAACAAACTCAGTGACTCGCTCCCGAGTGAACTGGGTCAACTCAGTAAACTCCAAACTCTCAACCTTGCCAACAACAATCTAAAAGGGGAGATTCCGAGTCAACTCGGTGAACTGAGTGAGCTTGTTTATCTGAATTTAAAGGCGAACCAGCTTGAGGGTCATATTCCACCGTCTCTAGCTCAACTGGGTAGTCTTCAAACTCTGGACTTGTCAAAGAACATGCTCAGTGGTGGGATTCCAGAGGAGTTGGGGAACATGGGTCAGTTACATTACATGGTTCTCTCTGAGAATCAACTCTATGGGACTATTCCAAGAACCATATGTTCCAATGCAACAAGTTTGGTGCAGTTGTTGATATTAAACTGTGGACTTCATGGTGAGATTCCAGCTGAGTTGATTCAATGCCAATCATTGAAACAGCTTGATTTGTCCAACAATTATCTTAATGGAACAATACCTCTCGAGGTTTATGGATTGAAGGGGCTAACTGATCTCTCCCTTTACAACAACAGCTTGGTTGGTTCAATCTCTCCCTTCATAGGGAACCTAACTAATTTGCAAACTCTTGGATTGTATCAGAACAAGTTGCAGGGTGCTCTGCCCAGAGAGATTGGGATGCTTGGGAAGCTGGAAAGACTATTTCTTTATGAGAATCAATTATCAGGGAAGATACCTTTGGAGATTGGTAACTGTTCAAGCTTGCAAATGATTGATTTTTTTGGGAATCATTTCAGTGGGGAAATTCCCTTTACTATTGGGAGATTGAAAGAGTTGAGTTTCCTTCACATTAGGCAGAATGAGCTTGTGGGTGAGATTCCTGCTACCCTTGGTAACTGTGGGAAACTGGAGGCGCTGGATTTGGCAGACAATCAGCTCTCAGGTGGGATTCCTGCAACATTTGGATTCCTCACATCATTGCAGCTGTTTATGCTCTACAACAATTCTCTCCAAGGTAGCCTTCCTCACCAACTGATAAATGTAGCAAACTTAACCAGAGTGAATCTTTCAAAGAACAAACTGAATGGTAGTTTGAATGCATTGTGTAGCTCTCGGTTGCTTCTCTCTTTTGATGTCACAGATAATGAATTTGATGGTGAAATCCCCTCTCACTTGGGAAGCTCACCCTCCCTTGAGAGGCTAAGATTAGGTAACAACAAATTTTCTGGTGAAATCCCAAGGACATTGGGAAAAATCACTAATTTGACATTGTTAGACCTCTCAGGAAATTCACTCACAGGACCAATACCATATGAACTTTCATTGTGTAATAAACTGACACACATTGATGTAGAAAATAACCTTTTATCTGGACGCATGCCACAATGGCTTGGAAGTTTGCCCCAACTGGGAGAGCTTAGGCTTTCATCCAATCAATTTTCTGGTCCTCTTCCACTAGGCCTATTCAAATTACCCGAGTTGCTGGTTCTTTCCTTGCATAACAATTCATTTAATGGAAGTCTCCCTGATGATATTGGTGATCTTGAATCCCTTAATGTCCTTAGACTTGAAAATAATAAGTTCTCTGGACCAATCCCTCATGCAATAGGTAAGTTGAGGAATCTTTATGAGCTCCAACTTTCCAGAAATAGCTTTGATGGTGAGATACCAACTGAGATTGGAAGTCTCCAAAATCTCCAAAGCATTTTAGACCTCAGTTGCAATAATCTTTCTGGTCACATCCCACCTTCTCTTGATATGCTGTCAAAATTGGAAAGACTTAATCTTTCTCACAATCAACTCACTGGACAAGTTCTTCTGTCAGTTGGTGAAATGAGGAGCTTGGGAACGTTTGATATCTCTTACAATAAGCTTGAAGGTGCATTGGATAAGCAATTCTCTCGCTGGCCATATGAGGCATTTGAAGGGAACCTAAATCTTTGTGGAGCCTCTCTTGGGCGGTGCAGTGCTCCCCATAACAAGCTTTCAGGCTCAAGTGAGGCATCAGTGATTATAGTCTCTGCCATTTCAACTTTTGCTGCAATAGCACTACTAATACTTACAGTGAGAATCTTCAAGAAAAACAAACAAGCTTTTTTCAGGAAAGGAAGTGAATTGAGTTGTGTTTTCTCCTCTTCTTCATCACAAGCAAGGAGACGAGCATTGTTCCCACTAAATGCTGCTGGAAAGAGAGATTTCAAATGGGAAGATATCATGGATGTGACAAACAATTTGAGTGATGAGTTCATAATTGGTTGTGGAGGTTCTGGGACAGTCTATAGAGTTGAATTGCCCACTGGAGAGACTGTGGCTGTCAAGAAGATTTTATGGAAAGATGATTATCTGTTAAACAAAAGCTTTATGAGAGAAGTTAAGACTCTGGGAAGGATTAGGCACAGACATCTGGTGAAACTGATAGGCTGTTGTAGCAATAGAAACAAAGGAACAGGTTGGAATCTGTTGATATATGAGTATATGGAGAATGGGAGTGTATGGGATTGGCTTCATGGAAAACCTCTCAAGGAAAGCAAAGCAGAGGGGAGCCTTGATTGGGACACAAGGTTCAAAATTGCTGTGGGATTAGCTCAAGGAGTGGAGTATCTTCATCATGATTGTGTACCAAAGATCATTCACAGGGACATCAAATCCAGCAACATATTGCTAGATTCCAGAATGGAGGCACACTTGGGAGATTTTGGACTAGCAAAAACACTCAGTGAGAATCATGATTCTTACACTGAGTCCAATTCTTGCTTTGCTGGGTCTTATGGTTACATAGCCCCAGAATATGCATACTCAATGAAGGCAACAGAGAAAAGTGATGTTTACAGCATGGGAATTGTGCTTATGGAACTTGTTAGTGGTAAAATGCCAACAGATGCAGCTTTTAGAGCAGATATGGACATGGTGAGATGGATGGAGATGAACATTGACATGCAAGGAACTGCACGAGAGGAATTGATAGATCCTGAGCTGAAACCCCTTTTACCTGGTGAAGAATTTGCTGCATTCCAAGTGCTTGAGATAGCCATACAGTGCACAAAAACTGCACCACAGGAGAGGCCATCATCACGGCAAGTATGTGATCTTCTTCAGGATGTTTCCAACAACAAAAAGGTGAACTTTGAGAAGATGAATTTGGATTATAACAAGTGA | 3804 | 0.4251 | MRFLTLAIVLLLCYSCGILVFCHGSLDSHESTLRVLLEVKSSFLGDPQNVLSDWSENNTDYCSWKGVSCELKKLNSKNLNDSVRVVVGLNLADSSLTGSISPSLGRLQNLLRLDLSSNYLTGPIPPSISNLISLESLLLFSNQLTGHIPTEFGSLLSLRVLRIGDNGLTGVIPASLGNVVNLVNLGLASCSLTGSIPPQLGQLSELENLNLQDNELKGPIPSELGNCSSLVNFTAADNKLSDSLPSELGQLSKLQTLNLANNNLKGEIPSQLGELSELVYLNLKANQLEGHIPPSLAQLGSLQTLDLSKNMLSGGIPEELGNMGQLHYMVLSENQLYGTIPRTICSNATSLVQLLILNCGLHGEIPAELIQCQSLKQLDLSNNYLNGTIPLEVYGLKGLTDLSLYNNSLVGSISPFIGNLTNLQTLGLYQNKLQGALPREIGMLGKLERLFLYENQLSGKIPLEIGNCSSLQMIDFFGNHFSGEIPFTIGRLKELSFLHIRQNELVGEIPATLGNCGKLEALDLADNQLSGGIPATFGFLTSLQLFMLYNNSLQGSLPHQLINVANLTRVNLSKNKLNGSLNALCSSRLLLSFDVTDNEFDGEIPSHLGSSPSLERLRLGNNKFSGEIPRTLGKITNLTLLDLSGNSLTGPIPYELSLCNKLTHIDVENNLLSGRMPQWLGSLPQLGELRLSSNQFSGPLPLGLFKLPELLVLSLHNNSFNGSLPDDIGDLESLNVLRLENNKFSGPIPHAIGKLRNLYELQLSRNSFDGEIPTEIGSLQNLQSILDLSCNNLSGHIPPSLDMLSKLERLNLSHNQLTGQVLLSVGEMRSLGTFDISYNKLEGALDKQFSRWPYEAFEGNLNLCGASLGRCSAPHNKLSGSSEASVIIVSAISTFAAIALLILTVRIFKKNKQAFFRKGSELSCVFSSSSSQARRRALFPLNAAGKRDFKWEDIMDVTNNLSDEFIIGCGGSGTVYRVELPTGETVAVKKILWKDDYLLNKSFMREVKTLGRIRHRHLVKLIGCCSNRNKGTGWNLLIYEYMENGSVWDWLHGKPLKESKAEGSLDWDTRFKIAVGLAQGVEYLHHDCVPKIIHRDIKSSNILLDSRMEAHLGDFGLAKTLSENHDSYTESNSCFAGSYGYIAPEYAYSMKATEKSDVYSMGIVLMELVSGKMPTDAAFRADMDMVRWMEMNIDMQGTAREELIDPELKPLLPGEEFAAFQVLEIAIQCTKTAPQERPSSRQVCDLLQDVSNNKKVNFEKMNLDYNK. | 1268 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g04124 | 1267 | SUPERFAMILY | Protein kinase-like (PK-like) | 945 | 1247 | IPR011009 | - | |
Seca5g04124 | 1267 | SUPERFAMILY | L domain-like | 584 | 845 | - | - | |
Seca5g04124 | 1267 | Pfam | Leucine rich repeat N-terminal domain | 33 | 69 | IPR013210 | - | |
Seca5g04124 | 1267 | SUPERFAMILY | L domain-like | 43 | 386 | - | - | |
Seca5g04124 | 1267 | Gene3D | Ribonuclease Inhibitor | 232 | 394 | IPR032675 | - | |
Seca5g04124 | 1267 | SMART | serkin_6 | 961 | 1247 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g04124 | 1267 | Gene3D | Ribonuclease Inhibitor | 155 | 231 | IPR032675 | - | |
Seca5g04124 | 1267 | FunFam | Uncharacterized protein | 392 | 485 | - | - | |
Seca5g04124 | 1267 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 583 | 875 | - | - | |
Seca5g04124 | 1267 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 29 | 198 | - | - | |
Seca5g04124 | 1267 | Pfam | Leucine Rich Repeat | 518 | 540 | IPR001611 | GO:0005515 | |
Seca5g04124 | 1267 | Pfam | Leucine Rich Repeat | 109 | 131 | IPR001611 | GO:0005515 | |
Seca5g04124 | 1267 | Pfam | Leucine rich repeat | 756 | 817 | IPR001611 | GO:0005515 | |
Seca5g04124 | 1267 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 922 | 1041 | - | - | |
Seca5g04124 | 1267 | ProSitePatterns | Protein kinases ATP-binding region signature. | 967 | 990 | IPR017441 | GO:0005524 | |
Seca5g04124 | 1267 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 295 | 391 | - | - | |
Seca5g04124 | 1267 | FunFam | LRR receptor-like serine/threonine-protein kinase FLS2 | 199 | 294 | - | - | |
Seca5g04124 | 1267 | Gene3D | Ribonuclease Inhibitor | 487 | 584 | IPR032675 | - | |
Seca5g04124 | 1267 | Gene3D | Ribonuclease Inhibitor | 395 | 486 | IPR032675 | - | |
Seca5g04124 | 1267 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 486 | 582 | - | - | |
Seca5g04124 | 1267 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1092 | 1104 | IPR008271 | GO:0004672|GO:0006468 | |
Seca5g04124 | 1267 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 613 | 1248 | - | - | |
Seca5g04124 | 1267 | FunFam | Leucine-rich repeat receptor-like protein kinase | 1042 | 1264 | - | - | |
Seca5g04124 | 1267 | Gene3D | Ribonuclease Inhibitor | 31 | 154 | IPR032675 | - | |
Seca5g04124 | 1267 | SMART | LRR_typ_2 | 155 | 178 | IPR003591 | - | |
Seca5g04124 | 1267 | SMART | LRR_typ_2 | 635 | 659 | IPR003591 | - | |
Seca5g04124 | 1267 | SMART | LRR_typ_2 | 804 | 824 | IPR003591 | - | |
Seca5g04124 | 1267 | SMART | LRR_typ_2 | 203 | 227 | IPR003591 | - | |
Seca5g04124 | 1267 | SMART | LRR_typ_2 | 444 | 468 | IPR003591 | - | |
Seca5g04124 | 1267 | SMART | LRR_typ_2 | 707 | 731 | IPR003591 | - | |
Seca5g04124 | 1267 | SMART | LRR_typ_2 | 107 | 131 | IPR003591 | - | |
Seca5g04124 | 1267 | SMART | LRR_typ_2 | 492 | 516 | IPR003591 | - | |
Seca5g04124 | 1267 | SMART | LRR_typ_2 | 420 | 443 | IPR003591 | - | |
Seca5g04124 | 1267 | SMART | LRR_typ_2 | 540 | 564 | IPR003591 | - | |
Seca5g04124 | 1267 | SMART | LRR_typ_2 | 755 | 779 | IPR003591 | - | |
Seca5g04124 | 1267 | SMART | LRR_typ_2 | 251 | 275 | IPR003591 | - | |
Seca5g04124 | 1267 | SMART | LRR_typ_2 | 299 | 323 | IPR003591 | - | |
Seca5g04124 | 1267 | PRINTS | Leucine-rich repeat signature | 375 | 388 | - | - | |
Seca5g04124 | 1267 | PRINTS | Leucine-rich repeat signature | 804 | 817 | - | - | |
Seca5g04124 | 1267 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1042 | 1266 | - | - | |
Seca5g04124 | 1267 | ProSiteProfiles | Protein kinase domain profile. | 961 | 1247 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g04124 | 1267 | Gene3D | Ribonuclease Inhibitor | 585 | 879 | IPR032675 | - | |
Seca5g04124 | 1267 | Pfam | Protein kinase domain | 966 | 1244 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g04124 | 1267 | SUPERFAMILY | L domain-like | 342 | 670 | - | - | |
Seca5g04124 | 1267 | Gene3D | Phosphorylase Kinase; domain 1 | 923 | 1041 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g04124 | Seca-Chr5 | 98729623 | 98733562 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g04124 | 170 | 743 | Receptor kinase-like Gene Family | AT5G56040 | 37.105 | 6.62e-91 | 316 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Seca5g04124 | Pkinase | 1.4e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g04124 | - | - | gmx:100797153 | 1821.59 |