Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04122 ATGGTGTCTTGTGCAGACATTCTAACTGCAGCTGCAAGGGATGCCACAGTTGAGATGGGTGGACCATATTGGGCAGTCCCTTATGGAAGGAAAGATGGAAGGGTCTCAATTGACAAGGAAGCTGAAATGATTCCTATGGGTCATGAAAACATTACTTCCTTGATTGAGTTTTTCCAATCCAAAGGCCTAACTGTTCTTGACTTGGTTGTTCTCTCAGGGGCTCATACTATTGGAAGGACTACTTGTGGATCCATTCAATATAGGCTGTACAATTACCAAGGAACAGGCAAAGCAGACCAATCCATAGATCCCAAATACTTGAACTTCTTGCAAAGGAAGTGTAGATGGGCCTCAGAGTATGTGGATCTTGATGCTACAACGCCTAAGGCCTTTGACCATATGTATTATATAAATCTTAAGAAGAAAATGGGATTGTTATCTACAGATCAGTTGTTATATTCTGATCCAAGGACTTCTCCCCTTGTTTCTGCATTGGCTACCACACCCTCTATTTTTCAGCACCAATTTGCGGTATCAATGGCAAAGTTTGGTGTCATTGATGTTCTCACGGGACAGGATGATGATGGAGAAATCAGGACCAATTGCAATTTTGTCAATGCTTATTGA 627 0.4179 MVSCADILTAAARDATVEMGGPYWAVPYGRKDGRVSIDKEAEMIPMGHENITSLIEFFQSKGLTVLDLVVLSGAHTIGRTTCGSIQYRLYNYQGTGKADQSIDPKYLNFLQRKCRWASEYVDLDATTPKAFDHMYYINLKKKMGLLSTDQLLYSDPRTSPLVSALATTPSIFQHQFAVSMAKFGVIDVLTGQDDDGEIRTNCNFVNAY. 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04122 208 ProSiteProfiles Plant heme peroxidase family profile. 1 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04122 208 SUPERFAMILY Heme-dependent peroxidases 2 206 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g04122 208 Gene3D - 1 206 - -
Seca5g04122 208 FunFam Peroxidase 45 183 - -
Seca5g04122 208 PANTHER - 2 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04122 208 PRINTS Plant peroxidase signature 122 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04122 208 PRINTS Plant peroxidase signature 1 11 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04122 208 PRINTS Plant peroxidase signature 138 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04122 208 PRINTS Plant peroxidase signature 20 35 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04122 208 PRINTS Plant peroxidase signature 178 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04122 208 PRINTS Plant peroxidase signature 66 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04122 208 PRINTS Haem peroxidase superfamily signature 2 19 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04122 208 PRINTS Haem peroxidase superfamily signature 67 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04122 208 PRINTS Haem peroxidase superfamily signature 124 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04122 208 PRINTS Haem peroxidase superfamily signature 20 32 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04122 208 CDD secretory_peroxidase 2 205 IPR033905 GO:0004601|GO:0042744
Seca5g04122 208 ProSitePatterns Peroxidases proximal heme-ligand signature. 67 77 IPR019793 -
Seca5g04122 208 Pfam Peroxidase 2 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04122 208 Gene3D Peroxidase, domain 2 45 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04122 Seca-Chr5 98704803 98707746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04122 2 207 Peroxidase AT1G30870 60.386 3.14e-88 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04122 K00430 - gmx:100798229 362.844