Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04117 ATGGCACCCTTGTTGTATTACTCCCTCCTCTCTCTAGCTTTCATTCTCACCCTCAAGATTTTGCTCCAAAAGAGGTTTAAAAACCTACCACCAGGCCCACCAACCTTCCCCATCATCGGCAACCTCCACCACCTCAAACAGCCTCTCCACCGCACCCTGGCAACCCTCTCCCAAAAATACGGCGACATCATGACCCTCTGGTTCGGATCACGCCTCGTGGTGGTTGTCTCTTCCCCTTCCCTAGTCCAAGAGTGCTTCTCCAAAAACGACGTCGCTTTAGCCAACCGCCCGCGTTTCCTCACAGGGAAGTACATCTTCTTCAACTACACCATTGTAGGTTCCGCCTCCTACGGCGACTACTGGCGCAACCTCCGCCGCATCACCAGCATCTACGTCCTCTCCAACCACCGCATCAACTCCTTCTCGGGAATCCGAAAGGACGAGGCGAGGAGGCTGGTACACAAGCTAGGCCAAGACACTAGCGGTGATTTTGCGAAGGTGGAATTGAGGTCGAGGTTGATGGAGATGACGTTCAACGCGATGATGAGAATGATATCGGGGAAGTGA 567 0.5362 MAPLLYYSLLSLAFILTLKILLQKRFKNLPPGPPTFPIIGNLHHLKQPLHRTLATLSQKYGDIMTLWFGSRLVVVVSSPSLVQECFSKNDVALANRPRFLTGKYIFFNYTIVGSASYGDYWRNLRRITSIYVLSNHRINSFSGIRKDEARRLVHKLGQDTSGDFAKVELRSRLMEMTFNAMMRMISGK. 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04117 188 Pfam Cytochrome P450 30 185 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04117 188 SUPERFAMILY Cytochrome P450 23 187 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04117 188 PANTHER CYTOCHROME P450 FAMILY 1 8 188 - -
Seca5g04117 188 Gene3D Cytochrome P450 22 188 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04117 188 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04117 188 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04117 188 PRINTS E-class P450 group I signature 176 188 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04117 Seca-Chr5 98647173 98647739 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04117 6 188 Cytochrome P450 AT2G23190 49.474 6.16e-58 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04117 K13260 - lja:Lj6g3v1415840.1 270.011