Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04114 ATGGCACCCTTGTTGTATTACTCCCTCCTCTCTCTAGCTTTCATTCTCACTCTCAAGATTTTGCTCCAAAAGAGGTTTAAAAACCTACCACCAGGCCCACCAACCGCCCCCATCATCGGCAACCTCCACCACCTCAAACAGCCTCTCCACCGCACCCTGGCAACCCTCTCCCAAAAATACGGCGACATCATGACCCTCTGGTTCGGGTCACGCCTCGTGGTGGTTGTCTCTTCCCCTTCCCTAGTCCAAGAGTGCTTCTCCAAAAACGACGTCGTTTTAGCCAACCGTCCGCGTTTCCTCACGGGGAAATACATCTTCTACAACTACACCACCCTAGGTTCCGCCTCGTACGGCGACCACTGGCGCAACCTCCGCCGCATCACCACCATCGACGTCCTCTCCAACCACCGCCTCAACTCCTTCTCGGGAATCCGAAAGGACGAGACGAAGAGGCTGGTACACAAGCTAGGCCAAGACAGTAGCGCTAGCGGTGATTTTGCGAAGGTGGAATTGAGGTCGAGGTTGACGGAGATGACGTTCAACGCGATGATGAGGATGATATCAGGGAAGAGATATTACGGTGAGGACTGTGATGTGACGGATGTGGAGGAAGCGAAGCAGTTCAGGGAGATAATATCGGAGATGCTGTCACTGTTAGGGGCTAACAATAAGAGTGACTTTTTGCCTTTGCTTAGGCTGTTTGACTTTGAGGATTTGGAGAAGAGGCTCAAGAGGATTGCAAAGAGAGCTGATGCGTTCTTGCAGGGACTCATTGAAGAGCATCGGAATGGGAAACACAGTGATGCAGCAGTGGACACCATGATTGACCATCTCTTGAAACTCAGCGAGTCTCAGCCTGAGTACTATTCCGATCACATGATCAAAGGTCTCATCCAGGCTATGCTTCTAGCTGGAACAGACACCTCAGCAGTGACAATAGAGTGGGTGATGTCTGAATTGTTGAACCATCCAGAAGTATTGAAAAAGGCAAAGGATGAACTAGACACACACATTGGAAAAGACCGATTGGTAGATGAGCAAGATTTGTCAAAACTCCCATACCTTCAAAATATTATATCTGAAACACTTCGATTGCATCCTCCCGCTCCATTGCTATTACCACATTATTCTTCAGAAGATTGTACTGTTGGGGGATTCAATATTCCACGAGACACAATAGTGTTGACTAATGCATGGCTTATTCATAGAGATCCTAAACTTTGGAGTGATCCCACAAGTTTTAAGCCTGAGAGATTTGAAAAAGAAGGGGAAGTAAACAAGTTAATTGCCTTCGGGTTAGGAAGAAGGGCCTGTCCTGGACTAGGCTTGGCTCAGCGTACGGTGGGCTTCACTGTGGGGTTATTGATTCAATGCTTTGAATGGGAACGAGAGAGTGAGGAAAAACTTGATATGTCGGAGGACAAAGGGATCACCATGCCAAAGCTAATTCCATTACAGGCCTTATGTAAAGCAAGACCTGTTGTCAATGATGTTATGAAGTAA 1503 0.4777 MAPLLYYSLLSLAFILTLKILLQKRFKNLPPGPPTAPIIGNLHHLKQPLHRTLATLSQKYGDIMTLWFGSRLVVVVSSPSLVQECFSKNDVVLANRPRFLTGKYIFYNYTTLGSASYGDHWRNLRRITTIDVLSNHRLNSFSGIRKDETKRLVHKLGQDSSASGDFAKVELRSRLTEMTFNAMMRMISGKRYYGEDCDVTDVEEAKQFREIISEMLSLLGANNKSDFLPLLRLFDFEDLEKRLKRIAKRADAFLQGLIEEHRNGKHSDAAVDTMIDHLLKLSESQPEYYSDHMIKGLIQAMLLAGTDTSAVTIEWVMSELLNHPEVLKKAKDELDTHIGKDRLVDEQDLSKLPYLQNIISETLRLHPPAPLLLPHYSSEDCTVGGFNIPRDTIVLTNAWLIHRDPKLWSDPTSFKPERFEKEGEVNKLIAFGLGRRACPGLGLAQRTVGFTVGLLIQCFEWERESEEKLDMSEDKGITMPKLIPLQALCKARPVVNDVMK. 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04114 500 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04114 500 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04114 500 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04114 500 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04114 500 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04114 500 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04114 500 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04114 500 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04114 500 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04114 500 FunFam Cytochrome P450 family protein 21 495 - -
Seca5g04114 500 CDD CYP81 61 485 - -
Seca5g04114 500 SUPERFAMILY Cytochrome P450 30 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04114 500 PANTHER CYTOCHROME P450 82C3-RELATED 12 492 - -
Seca5g04114 500 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04114 500 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04114 500 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04114 500 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04114 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Seca5g04114 500 Gene3D Cytochrome P450 22 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04114 500 Pfam Cytochrome P450 30 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04114 Seca-Chr5 98602955 98606291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04114 5 495 Cytochrome P450 AT4G37370 57.287 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04114 K13260 - ccaj:109806032 765.377